Literature DB >> 18445605

Cytoscape ESP: simple search of complex biological networks.

Maital Ashkenazi1, Gary D Bader, Allan Kuchinsky, Menachem Moshelion, David J States.   

Abstract

SUMMARY: Cytoscape enhanced search plugin (ESP) enables searching complex biological networks on multiple attribute fields using logical operators and wildcards. Queries use an intuitive syntax and simple search line interface. ESP is implemented as a Cytoscape plugin and complements existing search functions in the Cytoscape network visualization and analysis software, allowing users to easily identify nodes, edges and subgraphs of interest, even for very large networks. Availabiity: http://chianti.ucsd.edu/cyto_web/plugins/ CONTACT: ashkenaz@agri.huji.ac.il.

Entities:  

Mesh：

Year:  2008        PMID： 18445605      PMCID： PMC2427162          DOI： 10.1093/bioinformatics/btn208

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  8 in total

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  8 in total
  6 in total

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5.  HDAC1 regulates pluripotency and lineage specific transcriptional networks in embryonic and trophoblast stem cells.

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  6 in total

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