Literature DB >> 21078949

Roles of residues Cys69, Asn104, Phe160, Gly232, Ser237, and Asp240 in extended-spectrum beta-lactamase Toho-1.

Akiko Shimizu-Ibuka1, Mika Oishi, Shoko Yamada, Yoshikazu Ishii, Kiyoshi Mura, Hiroshi Sakai, Hiroshi Matsuzawa.   

Abstract

Toho-1, which is also designated CTX-M-44, is an extended-spectrum class A β-lactamase that has high activity toward cefotaxime. In this study, we investigated the roles of residues suggested to be critical for the substrate specificity expansion of Toho-1 in previous structural analyses. Six amino acid residues were replaced one by one with amino acids that are often observed in the corresponding position of non-extended-spectrum β-lactamases. The mutants produced in Escherichia coli strains were analyzed both for their kinetic properties and their effect on drug susceptibilities. The results indicate that the substitutions of Asn104 and Ser237 have certain effects on expansion of substrate specificity, while those of Cys69 and Phe160 have less effect, and that of Asp240 has no effect on the hydrolysis of any substrates tested. Gly232, which had been assumed to increase the flexibility of the substrate binding site, was revealed not to be critical for the expansion of substrate specificity of this enzyme, although this substitution resulted in deleterious effects on expression and stability of the enzyme.

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Year:  2010        PMID: 21078949      PMCID: PMC3019690          DOI: 10.1128/AAC.00098-10

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN: 0066-4804            Impact factor:   5.191


  38 in total

1.  Atomic resolution structures of CTX-M beta-lactamases: extended spectrum activities from increased mobility and decreased stability.

Authors:  Yu Chen; Julien Delmas; Jacques Sirot; Brian Shoichet; Richard Bonnet
Journal:  J Mol Biol       Date:  2005-04-29       Impact factor: 5.469

2.  Effect of substitution of Asn for Arg-276 in the cefotaxime-hydrolyzing class A beta-lactamase CTX-M-4.

Authors:  M Gazouli; N J Legakis; L S Tzouvelekis
Journal:  FEMS Microbiol Lett       Date:  1998-12-15       Impact factor: 2.742

3.  Sequence of the gene encoding a plasmid-mediated cefotaxime-hydrolyzing class A beta-lactamase (CTX-M-4): involvement of serine 237 in cephalosporin hydrolysis.

Authors:  M Gazouli; E Tzelepi; S V Sidorenko; L S Tzouvelekis
Journal:  Antimicrob Agents Chemother       Date:  1998-05       Impact factor: 5.191

Review 4.  Extended-spectrum and inhibitor-resistant TEM-type beta-lactamases: mutations, specificity, and three-dimensional structure.

Authors:  J R Knox
Journal:  Antimicrob Agents Chemother       Date:  1995-12       Impact factor: 5.191

5.  Role of ser-237 in the substrate specificity of the carbapenem-hydrolyzing class A beta-lactamase Sme-1.

Authors:  W Sougakoff; T Naas; P Nordmann; E Collatz; V Jarlier
Journal:  Biochim Biophys Acta       Date:  1999-08-17

6.  Role of residues 104, 164, 166, 238 and 240 in the substrate profile of PER-1 beta-lactamase hydrolysing third-generation cephalosporins.

Authors:  A T Bouthors; N Dagoneau-Blanchard; T Naas; P Nordmann; V Jarlier; W Sougakoff
Journal:  Biochem J       Date:  1998-03-15       Impact factor: 3.857

7.  Structure and dynamics of CTX-M enzymes reveal insights into substrate accommodation by extended-spectrum beta-lactamases.

Authors:  Julien Delmas; Yu Chen; Fabio Prati; Frédéric Robin; Brian K Shoichet; Richard Bonnet
Journal:  J Mol Biol       Date:  2007-10-16       Impact factor: 5.469

8.  Structure-function studies of arginine at position 276 in CTX-M beta-lactamases.

Authors:  Francisco José Pérez-Llarena; Mónica Cartelle; Susana Mallo; Alejandro Beceiro; Astrid Pérez; Rosa Villanueva; Antonio Romero; Richard Bonnet; Germán Bou
Journal:  J Antimicrob Chemother       Date:  2008-02-14       Impact factor: 5.790

9.  Crystal structure of the E166A mutant of extended-spectrum beta-lactamase Toho-1 at 1.8 A resolution.

Authors:  A Ibuka; A Taguchi; M Ishiguro; S Fushinobu; Y Ishii; S Kamitori; K Okuyama; K Yamaguchi; M Konno; H Matsuzawa
Journal:  J Mol Biol       Date:  1999-02-05       Impact factor: 5.469

10.  Enterobacter cloacae outbreak and emergence of quinolone resistance gene in Dutch hospital.

Authors:  Armand Paauw; Ad C Fluit; Jan Verhoef; Maurine A Leverstein-van Hall
Journal:  Emerg Infect Dis       Date:  2006-05       Impact factor: 6.883

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  7 in total

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Authors:  Alain Philippon; Patrick Slama; Paul Dény; Roger Labia
Journal:  Clin Microbiol Rev       Date:  2016-01       Impact factor: 26.132

2.  Distant and new mutations in CTX-M-1 beta-lactamase affect cefotaxime hydrolysis.

Authors:  Francisco José Pérez-Llarena; Frédéric Kerff; Olga Abián; Susana Mallo; María Carmen Fernández; Moreno Galleni; Javier Sancho; Germán Bou
Journal:  Antimicrob Agents Chemother       Date:  2011-07-05       Impact factor: 5.191

3.  Antibacterial Spectrum of a Tetrazole-Based Reversible Inhibitor of Serine β-Lactamases.

Authors:  Orville A Pemberton; Xiujun Zhang; Derek A Nichols; Kyle DeFrees; Priyadarshini Jaishankar; Richard Bonnet; Jessie Adams; Lindsey N Shaw; Adam R Renslo; Yu Chen
Journal:  Antimicrob Agents Chemother       Date:  2018-07-27       Impact factor: 5.191

4.  QM/MM modeling of class A β-lactamases reveals distinct acylation pathways for ampicillin and cefalexin.

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Journal:  Org Biomol Chem       Date:  2021-11-03       Impact factor: 3.876

5.  Kinetic and crystallographic studies of extended-spectrum GES-11, GES-12, and GES-14 β-lactamases.

Authors:  Heinrich Delbrück; Pierre Bogaerts; Michaël B Kupper; Roberta Rezende de Castro; Sandra Bennink; Youri Glupczynski; Moreno Galleni; Kurt M Hoffmann; Carine Bebrone
Journal:  Antimicrob Agents Chemother       Date:  2012-08-20       Impact factor: 5.191

6.  Defining Substrate Specificity in the CTX-M Family: the Role of Asp240 in Ceftazidime Hydrolysis.

Authors:  Barbara Ghiglione; María Margarita Rodríguez; Lucrecia Curto; Florencia Brunetti; Milena Dropa; Robert A Bonomo; Pablo Power; Gabriel Gutkind
Journal:  Antimicrob Agents Chemother       Date:  2018-05-25       Impact factor: 5.191

7.  Mechanistic Insights into Enzyme Catalysis from Explaining Machine-Learned Quantum Mechanical and Molecular Mechanical Minimum Energy Pathways.

Authors:  Zilin Song; Francesco Trozzi; Hao Tian; Chao Yin; Peng Tao
Journal:  ACS Phys Chem Au       Date:  2022-05-18
  7 in total

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