Literature DB >> 21075932

Genome sequence of the Marine Janibacter Sp. Strain HTCC2649.

J Cameron Thrash1, Jang-Cheon Cho, Anthony D Bertagnolli, Steve Ferriera, Justin Johnson, Kevin L Vergin, Stephen J Giovannoni.   

Abstract

Janibacter sp. strain HTCC2649 is a novel marine member of the Actinobacteria, family Intrasporangiaceae, and is closely related to Janibacter melonis CM2104(T) and Knoellia sinensis HKI 0119(T). The organism was isolated from a sample collected at Hydrostation S south of Bermuda by using high-throughput culturing techniques. Here we present the genome sequence of Janibacter sp. strain HTCC2649.

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Year:  2010        PMID： 21075932      PMCID： PMC3019837          DOI： 10.1128/JB.01298-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  11 in total

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2.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

3.  Cultivation of the ubiquitous SAR11 marine bacterioplankton clade.

Authors:  Michael S Rappé; Stephanie A Connon; Kevin L Vergin; Stephen J Giovannoni
Journal:  Nature       Date:  2002-08-08       Impact factor: 49.962

4.  High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates.

Authors:  Stephanie A Connon; Stephen J Giovannoni
Journal:  Appl Environ Microbiol       Date:  2002-08       Impact factor: 4.792

5.  Genome sequence of the novel marine member of the Gammaproteobacteria strain HTCC5015.

Authors:  J Cameron Thrash; Ulrich Stingl; Jang-Cheon Cho; Steve Ferriera; Justin Johnson; Kevin L Vergin; Stephen J Giovannoni
Journal:  J Bacteriol       Date:  2010-05-14       Impact factor: 3.490

6.  A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes.

Authors:  Susanne M D Goldberg; Justin Johnson; Dana Busam; Tamara Feldblyum; Steve Ferriera; Robert Friedman; Aaron Halpern; Hoda Khouri; Saul A Kravitz; Federico M Lauro; Kelvin Li; Yu-Hui Rogers; Robert Strausberg; Granger Sutton; Luke Tallon; Torsten Thomas; Eli Venter; Marvin Frazier; J Craig Venter
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-13       Impact factor: 11.205

7.  Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site.

Authors:  Ulrich Stingl; Harry James Tripp; Stephen J Giovannoni
Journal:  ISME J       Date:  2007-07-05       Impact factor: 10.302

Review 8.  The importance of culturing bacterioplankton in the 'omics' age.

Authors:  Stephen Giovannoni; Ulrich Stingl
Journal:  Nat Rev Microbiol       Date:  2007-10       Impact factor: 60.633

9.  Janibacter melonis sp. nov., isolated from abnormally spoiled oriental melon in Korea.

Authors:  Jung-Hoon Yoon; Hyang Burm Lee; Soo-Hwan Yeo; Jae-Eul Choi
Journal:  Int J Syst Evol Microbiol       Date:  2004-11       Impact factor: 2.747

10.  IMG/M: a data management and analysis system for metagenomes.

Authors:  Victor M Markowitz; Natalia N Ivanova; Ernest Szeto; Krishna Palaniappan; Ken Chu; Daniel Dalevi; I-Min A Chen; Yuri Grechkin; Inna Dubchak; Iain Anderson; Athanasios Lykidis; Konstantinos Mavromatis; Philip Hugenholtz; Nikos C Kyrpides
Journal:  Nucleic Acids Res       Date:  2007-10-11       Impact factor: 16.971
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  4 in total

1.  Genome sequence of Janibacter hoylei MTCC8307, isolated from the stratospheric air.

Authors:  S P Pawar; D P Dhotre; S A Shetty; S P Chowdhury; B L Chaudhari; Y S Shouche
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

2.  The role of speciation in positive Lowenstein-Jensen culture isolates from a high tuberculosis burden country.

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Journal:  PLoS One       Date:  2011-11-04       Impact factor: 3.240

3.  Biochemical properties of a new cold-active mono- and diacylglycerol lipase from marine member Janibacter sp. strain HTCC2649.

Authors:  Dongjuan Yuan; Dongming Lan; Ruipu Xin; Bo Yang; Yonghua Wang
Journal:  Int J Mol Sci       Date:  2014-06-12       Impact factor: 5.923

4.  Study on the potential of cold-active lipases from psychrotrophic fungi for detergent formulation.

Authors:  Sanjay Sahay; Deepak Chouhan
Journal:  J Genet Eng Biotechnol       Date:  2018-05-07
  4 in total

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