Literature DB >> 21074510

Advantages of isothermal titration calorimetry for xylanase kinetics in comparison to chemical-reducing-end assays.

Martin J Baumann1, Leigh Murphy, Nina Lei, Kristian B R M Krogh, Kim Borch, Peter Westh.   

Abstract

In lignocellulosic raw materials for biomass conversion, hemicelluloses constitute a substantial fraction, with xylan being the primary part. Although many pretreatments reduce the amount or change the distribution of xylan, it is important to degrade residual xylan so as to improve the overall yield. Typically, xylanase reaction rates are measured in stopped assays by chemical quantification of the reducing ends. With isothermal titration calorimetry (ITC), the heat flow of the hydrolysis can be measured in continuous fashion, with the reaction rate being directly proportional to the heat flow. Reaction enthalpies for carbohydrate hydrolysis are typically below 5kJ/mol, which is the limiting factor for straight forward calorimetric quantification of enzymatic reaction rates using current ITC technology. To increase the apparent reaction enthalpy, we employed a subsequent oxidation of hydrolysis products by carbohydrate oxidase and catalase. Here we show that the coupled assay with carbohydrate oxidase and catalase can be used to measure enzyme kinetics of a GH10 xylanase from Aspergillus aculeatus on birch xylan and wheat arabinoxylan. Results are discussed in the light of a critical analysis of the sensitivity of four chemical-reducing-end quantification methods using well-characterized substrates. 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 21074510     DOI: 10.1016/j.ab.2010.11.001

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  5 in total

1.  Hot biological catalysis: isothermal titration calorimetry to characterize enzymatic reactions.

Authors:  Luca Mazzei; Stefano Ciurli; Barbara Zambelli
Journal:  J Vis Exp       Date:  2014-04-04       Impact factor: 1.355

Review 2.  Destructuring plant biomass: focus on fungal and extremophilic cell wall hydrolases.

Authors:  Gea Guerriero; Jean-Francois Hausman; Joseph Strauss; Haluk Ertan; Khawar Sohail Siddiqui
Journal:  Plant Sci       Date:  2015-02-25       Impact factor: 4.729

3.  Xylan oligosaccharides and cellobiohydrolase I (TrCel7A) interaction and effect on activity.

Authors:  Martin J Baumann; Kim Borch; Peter Westh
Journal:  Biotechnol Biofuels       Date:  2011-10-31       Impact factor: 6.040

4.  Redox processes acidify and decarboxylate steam-pretreated lignocellulosic biomass and are modulated by LPMO and catalase.

Authors:  Ausra Peciulyte; Louise Samuelsson; Lisbeth Olsson; K C McFarland; Jesper Frickmann; Lars Østergård; Rune Halvorsen; Brian R Scott; Katja S Johansen
Journal:  Biotechnol Biofuels       Date:  2018-06-18       Impact factor: 6.040

5.  Choline sulfatase from Ensifer (Sinorhizobium) meliloti: Characterization of the unmodified enzyme.

Authors:  Juan José Sánchez-Romero; Luis F Olguin
Journal:  Biochem Biophys Rep       Date:  2015-08-07
  5 in total

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