Literature DB >> 21070239

Developmental validation of feline, bovine, equine, and cervid quantitative PCR assays.

Christina D Lindquist1, Jeffery J Evans, Elizabeth J Wictum.   

Abstract

Accurate DNA quantification is essential for optimizing DNA testing and minimizing sample consumption. Real-time quantitative polymerase chain reaction (qPCR) assays have been published for human and canine nuclear DNA, and the need for quantifying other forensically important species was evident. Following the strategy employed for the canine qPCR assay, we developed individual assays to accurately quantify feline, bovine, equine, and cervid nuclear DNA. Each TaqMan-based assay incorporates a genus-specific probe targeting the Melanocortin-1 Receptor gene and includes a piece of synthetic DNA that acts as an internal PCR control for detecting inhibition. Developmental validations were carried out following the revised guidelines of the Scientific Working Group on DNA Analysis Methods with modifications necessary for validation of nonhuman qPCR assays. All assays demonstrated the specificity, sensitivity, stability, reproducibility, accuracy, and precision required for forensic casework. The application of these assays to animal forensic DNA analysis has both conserved laboratory resources and improved genotyping results. 2010 American Academy of Forensic Sciences. Published 2010. This article is a U.S. Government work and is in the public domain in the U.S.A.

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Year:  2010        PMID: 21070239     DOI: 10.1111/j.1556-4029.2010.01605.x

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  5 in total

1.  Validation of reference genes for estimating wound age in contused rat skeletal muscle by quantitative real-time PCR.

Authors:  Jun-hong Sun; Liang-huan Nan; Cai-rong Gao; Ying-yuan Wang
Journal:  Int J Legal Med       Date:  2011-08-04       Impact factor: 2.686

2.  A nuclear DNA-based species determination and DNA quantification assay for common poultry species.

Authors:  J Ng; J Satkoski; A Premasuthan; S Kanthaswamy
Journal:  J Food Sci Technol       Date:  2012-11-28       Impact factor: 2.701

3.  Time-dependent expression of SNAT2 mRNA in the contused skeletal muscle of rats: a possible marker for wound age estimation.

Authors:  Qiu-xiang Du; Jun-hong Sun; Ling-yu Zhang; Xin-hua Liang; Xiang-jie Guo; Cai-rong Gao; Ying-yuan Wang
Journal:  Forensic Sci Med Pathol       Date:  2013-09-18       Impact factor: 2.007

4.  Real-time PCR-based assay to quantify the relative amount of human and mouse tissue present in tumor xenografts.

Authors:  Sergio Y Alcoser; David J Kimmel; Suzanne D Borgel; John P Carter; Kelly M Dougherty; Melinda G Hollingshead
Journal:  BMC Biotechnol       Date:  2011-12-16       Impact factor: 2.563

5.  SNP Miniplexes for Individual Identification of Random-Bred Domestic Cats.

Authors:  Ashley Brooks; Erica K Creighton; Barbara Gandolfi; Razib Khan; Robert A Grahn; Leslie A Lyons
Journal:  J Forensic Sci       Date:  2016-01-06       Impact factor: 1.832

  5 in total

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