Literature DB >> 2106584

Chromatin superstructure-dependent crosslinking with DNA of the histone H5 residues Thr1, His25 and His62.

A D Mirzabekov1, D V Pruss, K K Ebralidse.   

Abstract

The points of histone H5 interactions with DNA within nucleosomes and chromatin at different levels of compaction are delineated by identification of H5 amino acid residues that can be covalently bound to DNA. Three major crosslinkable points of H5 are His25, His62 (both within the globular part of the molecule), and N-terminal Thr1. His25 interacts with the terminal regions of nucleosomal DNA; His62 appears to bind more distal segments of the linker DNA. The His25-DNA crosslink predominates in the isolated mononucleosomes and persists throughout the chromatin condensation states studied, from extended oligonucleosomal chains to nuclei. His62 is the strongest crosslinking site in nuclei; in oligonucleosomes, the predominance of the His62-DNA crosslink requires the number of nucleosomes in the chain to be above some critical value. The Thr1-DNA crosslink is generated only in decondensed poly- or oligonucleosomes, but not in mononucleosomes. Thus, underlying the higher-order folding transitions of the nucleosomal chain is the restructuring of H5-DNA interactions.

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Year:  1990        PMID: 2106584     DOI: 10.1016/0022-2836(90)90366-T

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  16 in total

1.  Core histone N-termini play an essential role in mitotic chromosome condensation.

Authors:  A E de la Barre; V Gerson; S Gout; M Creaven; C D Allis; S Dimitrov
Journal:  EMBO J       Date:  2000-02-01       Impact factor: 11.598

2.  The N-terminus of histone H2B, but not that of histone H3 or its phosphorylation, is essential for chromosome condensation.

Authors:  A E de la Barre; D Angelov; A Molla; S Dimitrov
Journal:  EMBO J       Date:  2001-11-15       Impact factor: 11.598

3.  The linker histone homolog Hho1p from Saccharomyces cerevisiae represents a winged helix-turn-helix fold as determined by NMR spectroscopy.

Authors:  Katsuki Ono; Osamu Kusano; Sakurako Shimotakahara; Mitsuhiro Shimizu; Toshimasa Yamazaki; Heisaburo Shindo
Journal:  Nucleic Acids Res       Date:  2003-12-15       Impact factor: 16.971

4.  Complex of linker histone H5 with the nucleosome and its implications for chromatin packing.

Authors:  Li Fan; Victoria A Roberts
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-22       Impact factor: 11.205

5.  Mapping the interaction surface of linker histone H1(0) with the nucleosome of native chromatin in vivo.

Authors:  David T Brown; Tina Izard; Tom Misteli
Journal:  Nat Struct Mol Biol       Date:  2006-02-05       Impact factor: 15.369

6.  Persistent interactions of core histone tails with nucleosomal DNA following acetylation and transcription factor binding.

Authors:  V Mutskov; D Gerber; D Angelov; J Ausio; J Workman; S Dimitrov
Journal:  Mol Cell Biol       Date:  1998-11       Impact factor: 4.272

7.  Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1.

Authors:  Jan Bednar; Isabel Garcia-Saez; Ramachandran Boopathi; Amber R Cutter; Gabor Papai; Anna Reymer; Sajad H Syed; Imtiaz Nisar Lone; Ognyan Tonchev; Corinne Crucifix; Hervé Menoni; Christophe Papin; Dimitrios A Skoufias; Hitoshi Kurumizaka; Richard Lavery; Ali Hamiche; Jeffrey J Hayes; Patrick Schultz; Dimitar Angelov; Carlo Petosa; Stefan Dimitrov
Journal:  Mol Cell       Date:  2017-05-04       Impact factor: 17.970

8.  Identification of two DNA-binding sites on the globular domain of histone H5.

Authors:  F A Goytisolo; S E Gerchman; X Yu; C Rees; V Graziano; V Ramakrishnan; J O Thomas
Journal:  EMBO J       Date:  1996-07-01       Impact factor: 11.598

9.  Differential effect of H1 variant overproduction on gene expression is due to differences in the central globular domain.

Authors:  D T Brown; A Gunjan; B T Alexander; D B Sittman
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

10.  Differential association of HMG1 and linker histones B4 and H1 with dinucleosomal DNA: structural transitions and transcriptional repression.

Authors:  K Ura; K Nightingale; A P Wolffe
Journal:  EMBO J       Date:  1996-09-16       Impact factor: 11.598

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