Literature DB >> 21063765

Receiver operating characteristic (ROC) analysis of day 5 morphology grading and metabolomic Viability Score on predicting implantation outcome.

Emre Seli1, Can Bruce, Lucy Botros, Mark Henson, Pieter Roos, Kevin Judge, Thorir Hardarson, Aishling Ahlström, Paul Harrison, Michael Henman, Kathryn Go, Nicole Acevedo, Jeannette Siques, Michael Tucker, Denny Sakkas.   

Abstract

PURPOSE: Assessment of embryo viability is a key component of in vitro fertilization (IVF) and currently relies largely on embryo morphology and cleavage rate. In this study, we used receiver operating characteristic (ROC) analysis to compare the Viability Score (generated by metabolomic profiling of spent embryo culture media using near infrared (NIR) spectroscopy) to morphologic grading for predicting pregnancy in women undergoing single embryo transfer (SET) on day 5.
METHODS: A total of 198 spent embryo culture media samples were collected in four IVF centers located in the USA, Europe and Australia. First, 137 samples (training set) were analyzed by NIR to develop an algorithm that generates a Viability Score predictive of pregnancy for each sample. Next, 61 samples (validation set) were analyzed by observers blinded to embryo morphology and IVF outcome, using the Day 5 algorithm generated with the training set. Pregnancy was defined as fetal cardiac activity (FCA) at 12 weeks of gestation.
RESULTS: The Area Under the Curve (AUC) was greater for the metabolomic Viability Score compared to Morphology [Training set: 0.75 versus 0.55, p = 0.0011; Validation set: 0.68 versus 0.50, P = 0.021], and for a Composite score (obtained using a model combining Viability Score with morphologic grading), compared to morphology alone [0.74 versus 0.50, p = 0.004].
CONCLUSIONS: Our findings suggest that Viability Score alone or in combination with morphologic grading has the potential to be a better classifier for pregnancy outcome than morphology alone in women undergoing SET on day 5.

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Year:  2010        PMID: 21063765      PMCID: PMC3059520          DOI: 10.1007/s10815-010-9501-9

Source DB:  PubMed          Journal:  J Assist Reprod Genet        ISSN: 1058-0468            Impact factor:   3.412


  31 in total

1.  Characterization of a top quality embryo, a step towards single-embryo transfer.

Authors:  E Van Royen; K Mangelschots; D De Neubourg; M Valkenburg; M Van de Meerssche; G Ryckaert; W Eestermans; J Gerris
Journal:  Hum Reprod       Date:  1999-09       Impact factor: 6.918

2.  ROCR: visualizing classifier performance in R.

Authors:  Tobias Sing; Oliver Sander; Niko Beerenwinkel; Thomas Lengauer
Journal:  Bioinformatics       Date:  2005-08-11       Impact factor: 6.937

Review 3.  Dissection of culture media for embryos: the most important and less important components and characteristics.

Authors:  David K Gardner
Journal:  Reprod Fertil Dev       Date:  2008       Impact factor: 2.311

Review 4.  Assessment of embryo viability in assisted reproductive technology: shortcomings of current approaches and the emerging role of metabolomics.

Authors:  Jason G Bromer; Emre Seli
Journal:  Curr Opin Obstet Gynecol       Date:  2008-06       Impact factor: 1.927

5.  Metabolomic profiling by near-infrared spectroscopy as a tool to assess embryo viability: a novel, non-invasive method for embryo selection.

Authors:  C G Vergouw; L L Botros; P Roos; J W Lens; R Schats; P G A Hompes; D H Burns; C B Lambalk
Journal:  Hum Reprod       Date:  2008-04-18       Impact factor: 6.918

6.  Analysis of protein expression (secretome) by human and mouse preimplantation embryos.

Authors:  Mandy G Katz-Jaffe; William B Schoolcraft; David K Gardner
Journal:  Fertil Steril       Date:  2006-09       Impact factor: 7.329

7.  Prevention of twin pregnancy after in-vitro fertilization or intracytoplasmic sperm injection based on strict embryo criteria: a prospective randomized clinical trial.

Authors:  J Gerris; D De Neubourg; K Mangelschots; E Van Royen; M Van de Meerssche; M Valkenburg
Journal:  Hum Reprod       Date:  1999-10       Impact factor: 6.918

8.  Noninvasive metabolomic profiling of embryo culture media using Raman and near-infrared spectroscopy correlates with reproductive potential of embryos in women undergoing in vitro fertilization.

Authors:  Emre Seli; Denny Sakkas; Richard Scott; Shing C Kwok; Scott M Rosendahl; David H Burns
Journal:  Fertil Steril       Date:  2007-10-17       Impact factor: 7.329

Review 9.  Cleavage stage versus blastocyst stage embryo transfer in assisted conception.

Authors:  D A Blake; C M Farquhar; N Johnson; M Proctor
Journal:  Cochrane Database Syst Rev       Date:  2007-10-17

Review 10.  Accuracy of soluble human leukocyte antigen-G for predicting pregnancy among women undergoing infertility treatment: meta-analysis.

Authors:  M J Vercammen; A Verloes; H Van de Velde; P Haentjens
Journal:  Hum Reprod Update       Date:  2008-04-05       Impact factor: 15.610

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  11 in total

1.  Non-invasive metabolomic profiling of embryo culture media and morphology grading to predict implantation outcome in frozen-thawed embryo transfer cycles.

Authors:  Xiong Li; Yan Xu; Jing Fu; Wen-Bi Zhang; Su-Ying Liu; Xiao-Xi Sun
Journal:  J Assist Reprod Genet       Date:  2015-10-10       Impact factor: 3.412

Review 2.  Preimplantation embryo metabolism and culture systems: experience from domestic animals and clinical implications.

Authors:  V A Absalón-Medina; W R Butler; R O Gilbert
Journal:  J Assist Reprod Genet       Date:  2014-02-28       Impact factor: 3.412

3.  (1)H NMR based profiling of spent culture media cannot predict success of implantation for day 3 human embryos.

Authors:  Paolo Rinaudo; Shehua Shen; Jia Hua; Su Qian; Uday Prabhu; Erwin Garcia; Marcelle Cedars; Dinesh Sukumaran; Thomas Szyperski; Chris Andrews
Journal:  J Assist Reprod Genet       Date:  2012-10-23       Impact factor: 3.412

Review 4.  Metabolomic assessment of embryo viability.

Authors:  Asli Uyar; Emre Seli
Journal:  Semin Reprod Med       Date:  2014-02-10       Impact factor: 1.303

5.  Omics and Artificial Intelligence to Improve In Vitro Fertilization (IVF) Success: A Proposed Protocol.

Authors:  Charalampos Siristatidis; Sofoklis Stavros; Andrew Drakeley; Stefano Bettocchi; Abraham Pouliakis; Peter Drakakis; Michail Papapanou; Nikolaos Vlahos
Journal:  Diagnostics (Basel)       Date:  2021-04-21

Review 6.  Non-invasive methods for embryo selection.

Authors:  H N Sallam; N H Sallam; S H Sallam
Journal:  Facts Views Vis Obgyn       Date:  2016-06-27

7.  Spectroscopic analysis of embryo culture media for predicting reproductive potential in patients undergoing in vitro fertilization.

Authors:  Ercan Baştu; Uğur Parlatan; Günay Başar; Harika Yumru; Nima Bavili; Fatih Sağ; Sibel Bulgurcuoğlu; Faruk Buyru
Journal:  Turk J Obstet Gynecol       Date:  2017-09-30

Review 8.  Metabolomics for improving pregnancy outcomes in women undergoing assisted reproductive technologies.

Authors:  Charalampos S Siristatidis; Eleni Sertedaki; Dennis Vaidakis; Christos Varounis; Marialena Trivella
Journal:  Cochrane Database Syst Rev       Date:  2018-03-16

Review 9.  Metabolite Profiling in the Pursuit of Biomarkers for IVF Outcome: The Case for Metabolomics Studies.

Authors:  C McRae; V Sharma; J Fisher
Journal:  Int J Reprod Med       Date:  2013-01-16

10.  The Metabolomic Profile of Spent Culture Media from Day-3 Human Embryos Cultured under Low Oxygen Tension.

Authors:  Maria José de Los Santos; Pilar Gámiz; José María de Los Santos; Josep Lluís Romero; Nicolás Prados; Cristina Alonso; José Remohí; Francisco Dominguez
Journal:  PLoS One       Date:  2015-11-12       Impact factor: 3.240

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