Literature DB >> 21057372

Molecular analysis improves pathogen identification and epidemiologic study of pediatric parapneumonic empyema.

Anne J Blaschke1, Caroline Heyrend, Carrie L Byington, Ignacio Obando, Isabel Vazquez-Barba, Elizabeth H Doby, E Kent Korgenski, Xiaoming Sheng, Mark A Poritz, Judy A Daly, Edward O Mason, Andrew T Pavia, Krow Ampofo.   

Abstract

BACKGROUND: Parapneumonic empyema (PPE) is an increasingly common complication of bacterial pneumonia. Epidemiologic study is complicated by the low frequency of positive cultures. We sought to describe the epidemiology of PPE in children using molecular analysis of pleural fluid.
METHODS: We performed molecular testing for bacterial pathogens using archived pleural fluid from children hospitalized in 2009 with PPE. Real-time polymerase chain reaction (PCR) to detect Streptococcus pneumoniae, Staphylococcus aureus (including methicillin-resistant), Streptococcus pyogenes, Haemophilus influenzae, and Mycoplasma pneumoniae as well as PCR-based serotyping of S. pneumoniae was performed. Demographic, laboratory, and microbiologic data were abstracted.
RESULTS: Pleural fluid specimens from 63 children were available for PCR. By culture, a pathogen was isolated from blood and/or pleural fluid in 22 (35%) patients, with S. pneumoniae in 15 (24%), S. pyogenes in 3 (5%), and methicillin-resistant Staphylococcus aureus in 4 (6%). By PCR, a pathogen was detected in 53 (84%), including S. pneumoniae in 45 (71%). Compared with culture, PCR testing significantly increased detection of any pathogen (35% vs. 84%; P < 0.001) and of S. pneumoniae (24% vs. 71%; P < 0.001). Serotype 7F was the most common pneumococcal serotype detected. Comparison of culture-negative to culture-positive disease showed differences in both the pathogen profile and clinical outcomes.
CONCLUSIONS: Molecular analysis of pleural fluid more than doubled the detection of pathogens causing PPE. S. pneumoniae was the most common cause of both culture-positive and culture-negative PPE, although serotype distribution and outcomes differed.

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Year:  2011        PMID: 21057372      PMCID: PMC3053443          DOI: 10.1097/INF.0b013e3182002d14

Source DB:  PubMed          Journal:  Pediatr Infect Dis J        ISSN: 0891-3668            Impact factor:   2.129


  31 in total

1.  Empyema: the use of broad range 16S rDNA PCR for pathogen detection.

Authors:  S Saglani; K A Harris; C Wallis; J C Hartley
Journal:  Arch Dis Child       Date:  2005-01       Impact factor: 3.791

2.  Pleural effusions: the diagnostic separation of transudates and exudates.

Authors:  R W Light; M I Macgregor; P C Luchsinger; W C Ball
Journal:  Ann Intern Med       Date:  1972-10       Impact factor: 25.391

3.  An epidemiological investigation of a sustained high rate of pediatric parapneumonic empyema: risk factors and microbiological associations.

Authors:  Carrie L Byington; LaShonda Y Spencer; Timothy A Johnson; Andrew T Pavia; Daniel Allen; Edward O Mason; Sheldon Kaplan; Karen C Carroll; Judy A Daly; John C Christenson; Matthew H Samore
Journal:  Clin Infect Dis       Date:  2002-01-03       Impact factor: 9.079

4.  Association of 2009 pandemic influenza A (H1N1) infection and increased hospitalization with parapneumonic empyema in children in Utah.

Authors:  Krow Ampofo; Amy Herbener; Anne J Blaschke; Caroline Heyrend; Mark Poritz; Kent Korgenski; Robert Rolfs; Seema Jain; Maria da Glória Carvalho; Fabiana C Pimenta; Judy Daly; Edward O Mason; Carrie L Byington; Andrew T Pavia
Journal:  Pediatr Infect Dis J       Date:  2010-10       Impact factor: 2.129

5.  Incidence and etiologies of complicated parapneumonic effusions in children, 1996 to 2001.

Authors:  Steven C Buckingham; Michaela D King; Martha L Miller
Journal:  Pediatr Infect Dis J       Date:  2003-06       Impact factor: 2.129

6.  Streptococcus pneumoniae antigen test using positive blood culture bottles as an alternative method to diagnose pneumococcal bacteremia.

Authors:  Cathy A Petti; Christopher W Woods; L Barth Reller
Journal:  J Clin Microbiol       Date:  2005-05       Impact factor: 5.948

7.  Emergence of community-acquired methicillin-resistant Staphylococcus aureus in complicated parapneumonic effusions.

Authors:  Carmen Alfaro; Jaime Fergie; Kevin Purcell
Journal:  Pediatr Infect Dis J       Date:  2005-03       Impact factor: 2.129

8.  The changing face of pleural empyemas in children: epidemiology and management.

Authors:  Karen D Schultz; Leland L Fan; Jay Pinsky; Lyssa Ochoa; E O'Brian Smith; Sheldon L Kaplan; Mary L Brandt
Journal:  Pediatrics       Date:  2004-06       Impact factor: 7.124

9.  Clinical features, aetiology and outcome of empyema in children in the north east of England.

Authors:  K M Eastham; R Freeman; A M Kearns; G Eltringham; J Clark; J Leeming; D A Spencer
Journal:  Thorax       Date:  2004-06       Impact factor: 9.139

10.  High-resolution genotyping by amplicon melting analysis using LCGreen.

Authors:  Carl T Wittwer; Gudrun H Reed; Cameron N Gundry; Joshua G Vandersteen; Robert J Pryor
Journal:  Clin Chem       Date:  2003-06       Impact factor: 8.327

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  47 in total

1.  Evolving epidemiologic characteristics of invasive group a streptococcal disease in Utah, 2002-2010.

Authors:  Chris Stockmann; Krow Ampofo; Adam L Hersh; Anne J Blaschke; Brian A Kendall; Kent Korgenski; Judy Daly; Harry R Hill; Carrie L Byington; Andrew T Pavia
Journal:  Clin Infect Dis       Date:  2012-04-24       Impact factor: 9.079

2.  The management of community-acquired pneumonia in infants and children older than 3 months of age: clinical practice guidelines by the Pediatric Infectious Diseases Society and the Infectious Diseases Society of America.

Authors:  John S Bradley; Carrie L Byington; Samir S Shah; Brian Alverson; Edward R Carter; Christopher Harrison; Sheldon L Kaplan; Sharon E Mace; George H McCracken; Matthew R Moore; Shawn D St Peter; Jana A Stockwell; Jack T Swanson
Journal:  Clin Infect Dis       Date:  2011-08-31       Impact factor: 9.079

3.  Community-Acquired Pneumonia Requiring Hospitalization among U.S. Adults.

Authors:  Seema Jain; Wesley H Self; Richard G Wunderink; Sherene Fakhran; Robert Balk; Anna M Bramley; Carrie Reed; Carlos G Grijalva; Evan J Anderson; D Mark Courtney; James D Chappell; Chao Qi; Eric M Hart; Frank Carroll; Christopher Trabue; Helen K Donnelly; Derek J Williams; Yuwei Zhu; Sandra R Arnold; Krow Ampofo; Grant W Waterer; Min Levine; Stephen Lindstrom; Jonas M Winchell; Jacqueline M Katz; Dean Erdman; Eileen Schneider; Lauri A Hicks; Jonathan A McCullers; Andrew T Pavia; Kathryn M Edwards; Lyn Finelli
Journal:  N Engl J Med       Date:  2015-07-14       Impact factor: 91.245

4.  Sequential triplex real-time PCR assay for detecting 21 pneumococcal capsular serotypes that account for a high global disease burden.

Authors:  Fabiana C Pimenta; Alexis Roundtree; Ahmet Soysal; Mustafa Bakir; Mignon du Plessis; Nicole Wolter; Anne von Gottberg; Lesley McGee; Maria da Gloria Carvalho; Bernard Beall
Journal:  J Clin Microbiol       Date:  2012-12-05       Impact factor: 5.948

5.  Rapid detection of Streptococcus pyogenes in pleural fluid samples from pediatric patients with empyema.

Authors:  Xiaotian Zheng; Amanda O'Leary; James R Uhl; Robin Patel; Stanford T Shulman
Journal:  J Clin Microbiol       Date:  2012-05-23       Impact factor: 5.948

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Review 7.  Humoral immune responses to Streptococcus pneumoniae in the setting of HIV-1 infection.

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Journal:  Vaccine       Date:  2015-06-30       Impact factor: 3.641

8.  The Impact of Prior Antibiotic Therapy on Outcomes in Children Hospitalized for Community-Acquired Pneumonia.

Authors:  Eran Lavi; Oded Breuer
Journal:  Curr Infect Dis Rep       Date:  2016-01       Impact factor: 3.725

9.  Uncomplicated pneumonia in healthy Canadian children and youth: Practice points for management.

Authors:  Nicole Le Saux; Joan L Robinson
Journal:  Paediatr Child Health       Date:  2015 Nov-Dec       Impact factor: 2.253

10.  Population density profiles of nasopharyngeal carriage of 5 bacterial species in pre-school children measured using quantitative PCR offer potential insights into the dynamics of transmission.

Authors:  Valtyr Thors; Begonia Morales-Aza; Grace Pidwill; Ian Vipond; Peter Muir; Adam Finn
Journal:  Hum Vaccin Immunother       Date:  2016       Impact factor: 3.452

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