| Literature DB >> 21054005 |
Min K Roh1, Dan T Gillespie, Linda R Petzold.
Abstract
The weighted stochastic simulation algorithm (wSSA) was developed by Kuwahara and Mura [J. Chem. Phys. 129, 165101 (2008)] to efficiently estimate the probabilities of rare events in discrete stochastic systems. The wSSA uses importance sampling to enhance the statistical accuracy in the estimation of the probability of the rare event. The original algorithm biases the reaction selection step with a fixed importance sampling parameter. In this paper, we introduce a novel method where the biasing parameter is state-dependent. The new method features improved accuracy, efficiency, and robustness.Mesh:
Year: 2010 PMID: 21054005 PMCID: PMC3188645 DOI: 10.1063/1.3493460
Source DB: PubMed Journal: J Chem Phys ISSN: 0021-9606 Impact factor: 3.488