Literature DB >> 2105297

Pseudomonas putida KF715 bphABCD operon encoding biphenyl and polychlorinated biphenyl degradation: cloning, analysis, and expression in soil bacteria.

N Hayase1, K Taira, K Furukawa.   

Abstract

We cloned the entire bphABCD genes encoding degradation of biphenyl and polychlorinated biphenyls to benzoate and chlorobenzoates from the chromosomal DNA of Pseudomonas putida KF715. The nucleotide sequence revealed two open reading frames corresponding to the bphC gene encoding 2,3-dihydroxybiphenyl dioxygenase and the bphD gene encoding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid (ring-meta-cleavage compound) hydrolase.

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Year:  1990        PMID： 2105297      PMCID： PMC208555          DOI： 10.1128/jb.172.2.1160-1164.1990

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  17 in total

1.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors:  H C Birnboim; J Doly
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

2.  Degradation of polychlorinated biphenyls by two species of Achromobacter.

Authors:  M Ahmed; D D Focht
Journal:  Can J Microbiol       Date:  1973-01       Impact factor: 2.419

3.  Determinant of cistron specificity in bacterial ribosomes.

Authors:  J Shine; L Dalgarno
Journal:  Nature       Date:  1975-03-06       Impact factor: 49.962

Review 4.  Host: vector systems for gene cloning in Pseudomonas.

Authors:  M Bagdasarian; K N Timmis
Journal:  Curr Top Microbiol Immunol       Date:  1982       Impact factor: 4.291

5.  Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.

Authors:  C Yanisch-Perron; J Vieira; J Messing
Journal:  Gene       Date:  1985       Impact factor: 3.688

6.  Cloning of a gene cluster encoding biphenyl and chlorobiphenyl degradation in Pseudomonas pseudoalcaligenes.

Authors:  K Furukawa; T Miyazaki
Journal:  J Bacteriol       Date:  1986-05       Impact factor: 3.490

7.  Effect of chlorine substitution on the bacterial metabolism of various polychlorinated biphenyls.

Authors:  K Furukawa; N Tomizuka; A Kamibayashi
Journal:  Appl Environ Microbiol       Date:  1979-08       Impact factor: 4.792

8.  Microbial metabolism of polychlorinated biphenyls. Studies on the relative degradability of polychlorinated biphenyl components by Alkaligenes sp.

Authors:  K Furukawa; F Matsumura
Journal:  J Agric Food Chem       Date:  1976 Mar-Apr       Impact factor: 5.279

9.  [Ischemic cerebral symptoms after subarachnoid hemorrhage due to aneurysmal rupture (author's transl)].

Authors:  M Kutsuna; K Someda; K Morita; Y Yamanouchi; T Kurimoto; Y Kawamura; H Matsumura
Journal:  No Shinkei Geka       Date:  1978-06

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205
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  42 in total

Review 1.  Biphenyl dioxygenases: functional versatilities and directed evolution.

Authors:  Kensuke Furukawa; Hikaru Suenaga; Masatoshi Goto
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

Review 2.  Molecular mechanisms of genetic adaptation to xenobiotic compounds.

Authors:  J R van der Meer; W M de Vos; S Harayama; A J Zehnder
Journal:  Microbiol Rev       Date:  1992-12

Review 3.  Biodegradation of halogenated organic compounds.

Authors:  G R Chaudhry; S Chapalamadugu
Journal:  Microbiol Rev       Date:  1991-03

4.  Three of the seven bphC genes of Rhodococcus erythropolis TA421, isolated from a termite ecosystem, are located on an indigenous plasmid associated with biphenyl degradation.

Authors:  S Kosono; M Maeda; F Fuji; H Arai; T Kudo
Journal:  Appl Environ Microbiol       Date:  1997-08       Impact factor: 4.792

5.  Expression, localization, and functional analysis of polychlorinated biphenyl degradation genes cbpABCD of Pseudomonas putida.

Authors:  A A Khan; S K Walia
Journal:  Appl Environ Microbiol       Date:  1991-05       Impact factor: 4.792

6.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1990-08-25       Impact factor: 16.971

7.  Evolutionary relationships among extradiol dioxygenases.

Authors:  L D Eltis; J T Bolin
Journal:  J Bacteriol       Date:  1996-10       Impact factor: 3.490

8.  Two nearly identical aromatic compound hydrolase genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1.

Authors:  A Yamada; H Kishi; K Sugiyama; T Hatta; K Nakamura; E Masai; M Fukuda
Journal:  Appl Environ Microbiol       Date:  1998-06       Impact factor: 4.792

9.  2-oxo-1,2-dihydroquinoline 8-monooxygenase: phylogenetic relationship to other multicomponent nonheme iron oxygenases.

Authors:  B Rosche; B Tshisuaka; B Hauer; F Lingens; S Fetzner
Journal:  J Bacteriol       Date:  1997-06       Impact factor: 3.490

10.  Uncovering the protocatechuate 2,3-cleavage pathway genes.

Authors:  Daisuke Kasai; Toshihiro Fujinami; Tomokuni Abe; Kohei Mase; Yoshihiro Katayama; Masao Fukuda; Eiji Masai
Journal:  J Bacteriol       Date:  2009-08-28       Impact factor: 3.490
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