Literature DB >> 21049125

Multitude of binding modes attainable by intrinsically disordered proteins: a portrait gallery of disorder-based complexes.

Vladimir N Uversky1.   

Abstract

Proteins are constantly involved in the multitude of various interactions creating sophisticated networks which define and control all (or almost all) the biological processes taking place in any living organism. Intrinsically disordered proteins or regions play a number of crucial roles in mediating protein interactions. The lack of fixed structure protruding to the high level of intrinsic dynamics and almost unrestricted flexibility at various structure levels, being the major characteristics of intrinsically disordered proteins, provides them with unprecedented advantages over the ordered proteins. The binding modes attainable by disordered proteins are highly diverse, creating a multitude of unusual complexes. Although the majority of studied to date intrinsic disorder-based complexes are ordered or static entities originating due to the global or local disorder-to-order transitions, a new development is the discovery of dynamic complexes in which intrinsically disordered proteins continue to sample an ensemble of rapidly interconverting conformations mostly devoid of structure even in their bound state. The goal of this critical review is to illustrate binding plasticity of intrinsically disordered proteins by representing a portrait gallery of the disorder-based complexes (119 references).

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Year:  2010        PMID: 21049125     DOI: 10.1039/c0cs00057d

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  102 in total

1.  Structural dynamics and multiregion interactions in dynein-dynactin recognition.

Authors:  Jessica L Morgan; Yujuan Song; Elisar Barbar
Journal:  J Biol Chem       Date:  2011-09-19       Impact factor: 5.157

2.  Nucleocytoplasmic transport: a role for nonspecific competition in karyopherin-nucleoporin interactions.

Authors:  Jaclyn Tetenbaum-Novatt; Loren E Hough; Roxana Mironska; Anna Sophia McKenney; Michael P Rout
Journal:  Mol Cell Proteomics       Date:  2012-02-22       Impact factor: 5.911

3.  Multiscaled exploration of coupled folding and binding of an intrinsically disordered molecular recognition element in measles virus nucleoprotein.

Authors:  Yong Wang; Xiakun Chu; Sonia Longhi; Philippe Roche; Wei Han; Erkang Wang; Jin Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

4.  Disorder Mediated Oligomerization of DISC1 Proteins Revealed by Coarse-Grained Molecular Dynamics Simulations.

Authors:  Julien Roche; Davit A Potoyan
Journal:  J Phys Chem B       Date:  2019-10-30       Impact factor: 2.991

5.  The cytoplasmic domain of the T-cell receptor zeta subunit does not form disordered dimers.

Authors:  Amanda Nourse; Tanja Mittag
Journal:  J Mol Biol       Date:  2013-10-10       Impact factor: 5.469

6.  Expanding the proteome: disordered and alternatively folded proteins.

Authors:  H Jane Dyson
Journal:  Q Rev Biophys       Date:  2011-07-01       Impact factor: 5.318

Review 7.  Multi-functionality of proteins involved in GPCR and G protein signaling: making sense of structure-function continuum with intrinsic disorder-based proteoforms.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2019-08-19       Impact factor: 9.261

8.  Network mapping of the conformational heterogeneity of SOD1 by deploying statistical cluster analysis of FTIR spectra.

Authors:  Sourav Chowdhury; Sagnik Sen; Amrita Banerjee; Vladimir N Uversky; Ujjwal Maulik; Krishnananda Chattopadhyay
Journal:  Cell Mol Life Sci       Date:  2019-04-22       Impact factor: 9.261

9.  On the potential of using peculiarities of the protein intrinsic disorder distribution in mitochondrial cytochrome b to identify the source of animal meats.

Authors:  Haitham A Yacoub; Mahmoud A Sadek; Vladimir N Uversky
Journal:  Intrinsically Disord Proteins       Date:  2017-03-07

10.  Structural landscape of the proline-rich domain of Sos1 nucleotide exchange factor.

Authors:  Caleb B McDonald; Vikas Bhat; Dmitry Kurouski; David C Mikles; Brian J Deegan; Kenneth L Seldeen; Igor K Lednev; Amjad Farooq
Journal:  Biophys Chem       Date:  2013-03-05       Impact factor: 2.352

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