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Literature DB >> 21037013

Complete genome sequence of strain HTCC2170, a novel member of the genus Maribacter in the family Flavobacteriaceae.

Hyun-Myung Oh¹, Ilnam Kang, Seung-Jo Yang, Yoonra Jang, Kevin L Vergin, Stephen J Giovannoni, Jang-Cheon Cho.

Abstract

Strain HTCC2170 was isolated from surface waters off the Oregon coast using dilution-to-extinction culturing. Here, we present the finished genome sequence of a marine bacterium, Maribacter sp. strain HTCC2170. Strain sp. HTCC2170 is predicted to be a facultatively aerobic chemoorganotroph that, based on genomic sequence analysis, is capable of macromolecule degradation and anaerobic respiration.

Entities: Species

Mesh：

Year: 2010 PMID： 21037013 PMCID： PMC3019928 DOI： 10.1128/JB.01207-10

Source DB: PubMed Journal: J Bacteriol ISSN： 0021-9193 Impact factor: 3.490

17 in total

1. GenDB--an open source genome annotation system for prokaryote genomes.

Authors: Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal: Nucleic Acids Res Date: 2003-04-15 Impact factor: 16.971

2. Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family.

Authors: Jean-Francois Bernardet; Yasuyoshi Nakagawa; Barry Holmes
Journal: Int J Syst Evol Microbiol Date: 2002-05 Impact factor: 2.747

3. Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria.

Authors: Jang-Cheon Cho; Stephen J Giovannoni
Journal: Appl Environ Microbiol Date: 2004-01 Impact factor: 4.792

4. High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates.

Authors: Stephanie A Connon; Stephen J Giovannoni
Journal: Appl Environ Microbiol Date: 2002-08 Impact factor: 4.792

5. Bacterial diversity in surface sediments from the Pacific Arctic Ocean.

Authors: Huirong Li; Yong Yu; Wei Luo; Yinxin Zeng; Bo Chen
Journal: Extremophiles Date: 2009-01-20 Impact factor: 2.395

6. Maribacter arcticus sp. nov., isolated from Arctic marine sediment.

Authors: Kyeung Hee Cho; Soon Gyu Hong; Hyun Hee Cho; Yoo Kyung Lee; Jongsik Chun; Hong Kum Lee
Journal: Int J Syst Evol Microbiol Date: 2008-06 Impact factor: 2.747

7. Maribacter stanieri sp. nov., a marine bacterium of the family Flavobacteriaceae.

Authors: Olga I Nedashkovskaya; Seung Bum Kim; Valery V Mikhailov
Journal: Int J Syst Evol Microbiol Date: 2009-07-31 Impact factor: 2.747

8. Maribacter antarcticus sp. nov., a psychrophilic bacterium isolated from a culture of the Antarctic green alga Pyramimonas gelidicola.

Authors: Gwang Il Zhang; Chung Yeon Hwang; Sung-Ho Kang; Byung Cheol Cho
Journal: Int J Syst Evol Microbiol Date: 2009-06 Impact factor: 2.747

9. Description of Maribacter forsetii sp. nov., a marine Flavobacteriaceae isolated from North Sea water, and emended description of the genus Maribacter.

Authors: Tristan Barbeyron; Flavien Carpentier; Stéphane L'haridon; Margarete Schüler; Gurvan Michel; Rudolf Amann
Journal: Int J Syst Evol Microbiol Date: 2008-04 Impact factor: 2.747

10. The integrated microbial genomes system: an expanding comparative analysis resource.

Authors: Victor M Markowitz; I-Min A Chen; Krishna Palaniappan; Ken Chu; Ernest Szeto; Yuri Grechkin; Anna Ratner; Iain Anderson; Athanasios Lykidis; Konstantinos Mavromatis; Natalia N Ivanova; Nikos C Kyrpides
Journal: Nucleic Acids Res Date: 2009-10-28 Impact factor: 16.971

5 in total

Complete genome sequence of strain HTCC2170, a novel member of the genus Maribacter in the family Flavobacteriaceae.

1. GenDB--an open source genome annotation system for prokaryote genomes.

2. Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family.

3. Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria.

4. High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates.

5. Bacterial diversity in surface sediments from the Pacific Arctic Ocean.

6. Maribacter arcticus sp. nov., isolated from Arctic marine sediment.

7. Maribacter stanieri sp. nov., a marine bacterium of the family Flavobacteriaceae.

8. Maribacter antarcticus sp. nov., a psychrophilic bacterium isolated from a culture of the Antarctic green alga Pyramimonas gelidicola.

9. Description of Maribacter forsetii sp. nov., a marine Flavobacteriaceae isolated from North Sea water, and emended description of the genus Maribacter.

10. The integrated microbial genomes system: an expanding comparative analysis resource.

1. Complete genome sequence of Algoriphagus sp. PR1, bacterial prey of a colony-forming choanoflagellate.

2. Gliding motility and Por secretion system genes are widespread among members of the phylum bacteroidetes.

3. Environmental and gut bacteroidetes: the food connection.

4. Aurelia aurita Ephyrae Reshape a Coastal Microbial Community.

5. A bacterial sulfonolipid triggers multicellular development in the closest living relatives of animals.