Literature DB >> 21036994

Cadherin domains in the polysaccharide-degrading marine bacterium Saccharophagus degradans 2-40 are carbohydrate-binding modules.

Milana Fraiberg1, Ilya Borovok, Edward A Bayer, Ronald M Weiner, Raphael Lamed.   

Abstract

The complex polysaccharide-degrading marine bacterium Saccharophagus degradans strain 2-40 produces putative proteins that contain numerous cadherin and cadherin-like domains involved in intercellular contact interactions. The current study reveals that both domain types exhibit reversible calcium-dependent binding to different complex polysaccharides which serve as growth substrates for the bacterium.

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Year:  2010        PMID： 21036994      PMCID： PMC3019924          DOI： 10.1128/JB.00842-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  16 in total

1.  CHDL: a cadherin-like domain in Proteobacteria and Cyanobacteria.

Authors:  Lihuan Cao; Xiaomei Yan; Christopher W Borysenko; Harry C Blair; Chaoqun Wu; Long Yu
Journal:  FEMS Microbiol Lett       Date:  2005-10-15       Impact factor: 2.742

Review 2.  Mechanism and dynamics of cadherin adhesion.

Authors:  Deborah Leckband; Anil Prakasam
Journal:  Annu Rev Biomed Eng       Date:  2006       Impact factor: 9.590

3.  Cadherin conformations associated with dimerization and adhesion.

Authors:  Hitomi Tsuiji; Liang Xu; Kathleen Schwartz; Barry M Gumbiner
Journal:  J Biol Chem       Date:  2007-03-08       Impact factor: 5.157

4.  Isolation of a new polysaccharide-digesting bacterium from a salt marsh.

Authors:  G Andrykovitch; I Marx
Journal:  Appl Environ Microbiol       Date:  1988-04       Impact factor: 4.792

5.  Genomic and proteomic analyses of the agarolytic system expressed by Saccharophagus degradans 2-40.

Authors:  Nathan A Ekborg; Larry E Taylor; Atkinson G Longmire; Bernard Henrissat; Ronald M Weiner; Steven W Hutcheson
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

6.  Phylogenetic characterization of marine bacterium strain 2-40, a degrader of complex polysaccharides.

Authors:  J M González; R M Weiner
Journal:  Int J Syst Evol Microbiol       Date:  2000-03       Impact factor: 2.747

7.  Phylogenetic relationships among marine Alteromonas-like proteobacteria: emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. nov., Colwelliaceae fam. nov., Shewanellaceae fam. nov., Moritellaceae fam. nov., Ferrimonadaceae fam. nov., Idiomarinaceae fam. nov. and Psychromonadaceae fam. nov.

Authors:  Elena P Ivanova; Sébastien Flavier; Richard Christen
Journal:  Int J Syst Evol Microbiol       Date:  2004-09       Impact factor: 2.747

8.  The DxDxDG motif for calcium binding: multiple structural contexts and implications for evolution.

Authors:  Daniel J Rigden; Michael Y Galperin
Journal:  J Mol Biol       Date:  2004-10-29       Impact factor: 5.469

Review 9.  Carbohydrate-binding modules: fine-tuning polysaccharide recognition.

Authors:  Alisdair B Boraston; David N Bolam; Harry J Gilbert; Gideon J Davies
Journal:  Biochem J       Date:  2004-09-15       Impact factor: 3.857

10.  Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T.

Authors:  Ronald M Weiner; Larry E Taylor; Bernard Henrissat; Loren Hauser; Miriam Land; Pedro M Coutinho; Corinne Rancurel; Elizabeth H Saunders; Atkinson G Longmire; Haitao Zhang; Edward A Bayer; Harry J Gilbert; Frank Larimer; Igor B Zhulin; Nathan A Ekborg; Raphael Lamed; Paul M Richardson; Ilya Borovok; Steven Hutcheson
Journal:  PLoS Genet       Date:  2008-05-30       Impact factor: 5.917
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  4 in total

1.  Expression patterns reveal niche diversification in a marine microbial assemblage.

Authors:  Scott M Gifford; Shalabh Sharma; Melissa Booth; Mary Ann Moran
Journal:  ISME J       Date:  2012-08-30       Impact factor: 10.302

2.  RapA2 is a calcium-binding lectin composed of two highly conserved cadherin-like domains that specifically recognize Rhizobium leguminosarum acidic exopolysaccharides.

Authors:  Patricia L Abdian; Julio J Caramelo; Nora Ausmees; Angeles Zorreguieta
Journal:  J Biol Chem       Date:  2012-12-12       Impact factor: 5.157

3.  S-layer homology domain proteins Csac_0678 and Csac_2722 are implicated in plant polysaccharide deconstruction by the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus.

Authors:  Inci Ozdemir; Sara E Blumer-Schuette; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2011-12-02       Impact factor: 4.792

Review 4.  Carbohydrase systems of Saccharophagus degradans degrading marine complex polysaccharides.

Authors:  Steven W Hutcheson; Haitao Zhang; Maxim Suvorov
Journal:  Mar Drugs       Date:  2011-04-21       Impact factor: 6.085
  4 in total

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