Literature DB >> 20980987

Genome-wide association studies coming of age in rice.

Richard M Clark.   

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Year:  2010        PMID： 20980987     DOI： 10.1038/ng1110-926

Source DB:  PubMed          Journal:  Nat Genet        ISSN： 1061-4036            Impact factor:   38.330


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  15 in total

1.  Genome-wide association studies of 14 agronomic traits in rice landraces.

Authors:  Xuehui Huang; Xinghua Wei; Tao Sang; Qiang Zhao; Qi Feng; Yan Zhao; Canyang Li; Chuanrang Zhu; Tingting Lu; Zhiwu Zhang; Meng Li; Danlin Fan; Yunli Guo; Ahong Wang; Lu Wang; Liuwei Deng; Wenjun Li; Yiqi Lu; Qijun Weng; Kunyan Liu; Tao Huang; Taoying Zhou; Yufeng Jing; Wei Li; Zhang Lin; Edward S Buckler; Qian Qian; Qi-Fa Zhang; Jiayang Li; Bin Han
Journal:  Nat Genet       Date:  2010-10-24       Impact factor: 38.330

2.  Whole-genome patterns of common DNA variation in three human populations.

Authors:  David A Hinds; Laura L Stuve; Geoffrey B Nilsen; Eran Halperin; Eleazar Eskin; Dennis G Ballinger; Kelly A Frazer; David R Cox
Journal:  Science       Date:  2005-02-18       Impact factor: 47.728

Review 3.  Association mapping: critical considerations shift from genotyping to experimental design.

Authors:  Sean Myles; Jason Peiffer; Patrick J Brown; Elhan S Ersoz; Zhiwu Zhang; Denise E Costich; Edward S Buckler
Journal:  Plant Cell       Date:  2009-08-04       Impact factor: 11.277

4.  Genomewide SNP variation reveals relationships among landraces and modern varieties of rice.

Authors:  Kenneth L McNally; Kevin L Childs; Regina Bohnert; Rebecca M Davidson; Keyan Zhao; Victor J Ulat; Georg Zeller; Richard M Clark; Douglas R Hoen; Thomas E Bureau; Renee Stokowski; Dennis G Ballinger; Kelly A Frazer; David R Cox; Badri Padhukasahasram; Carlos D Bustamante; Detlef Weigel; David J Mackill; Richard M Bruskiewich; Gunnar Rätsch; C Robin Buell; Hei Leung; Jan E Leach
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-13       Impact factor: 11.205

5.  Natural genetic variation in lycopene epsilon cyclase tapped for maize biofortification.

Authors:  Carlos E Harjes; Torbert R Rocheford; Ling Bai; Thomas P Brutnell; Catherine Bermudez Kandianis; Stephen G Sowinski; Ann E Stapleton; Ratnakar Vallabhaneni; Mark Williams; Eleanore T Wurtzel; Jianbing Yan; Edward S Buckler
Journal:  Science       Date:  2008-01-18       Impact factor: 47.728

6.  The 1001 genomes project for Arabidopsis thaliana.

Authors:  Detlef Weigel; Richard Mott
Journal:  Genome Biol       Date:  2009-05-27       Impact factor: 13.583

7.  The extent of linkage disequilibrium in rice (Oryza sativa L.).

Authors:  Kristie A Mather; Ana L Caicedo; Nicholas R Polato; Kenneth M Olsen; Susan McCouch; Michael D Purugganan
Journal:  Genetics       Date:  2007-10-18       Impact factor: 4.562

8.  Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana.

Authors:  Richard M Clark; Gabriele Schweikert; Christopher Toomajian; Stephan Ossowski; Georg Zeller; Paul Shinn; Norman Warthmann; Tina T Hu; Glenn Fu; David A Hinds; Huaming Chen; Kelly A Frazer; Daniel H Huson; Bernhard Schölkopf; Magnus Nordborg; Gunnar Rätsch; Joseph R Ecker; Detlef Weigel
Journal:  Science       Date:  2007-07-20       Impact factor: 47.728

9.  Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.

Authors:  Susanna Atwell; Yu S Huang; Bjarni J Vilhjálmsson; Glenda Willems; Matthew Horton; Yan Li; Dazhe Meng; Alexander Platt; Aaron M Tarone; Tina T Hu; Rong Jiang; N Wayan Muliyati; Xu Zhang; Muhammad Ali Amer; Ivan Baxter; Benjamin Brachi; Joanne Chory; Caroline Dean; Marilyne Debieu; Juliette de Meaux; Joseph R Ecker; Nathalie Faure; Joel M Kniskern; Jonathan D G Jones; Todd Michael; Adnane Nemri; Fabrice Roux; David E Salt; Chunlao Tang; Marco Todesco; M Brian Traw; Detlef Weigel; Paul Marjoram; Justin O Borevitz; Joy Bergelson; Magnus Nordborg
Journal:  Nature       Date:  2010-03-24       Impact factor: 49.962

10.  Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology.

Authors:  Richard Cronn; Aaron Liston; Matthew Parks; David S Gernandt; Rongkun Shen; Todd Mockler
Journal:  Nucleic Acids Res       Date:  2008-08-27       Impact factor: 16.971
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  7 in total

1.  Identifying loci influencing grain number by microsatellite screening in bread wheat (Triticum aestivum L.).

Authors:  Dongling Zhang; Chenyang Hao; Lanfen Wang; Xueyong Zhang
Journal:  Planta       Date:  2012-07-21       Impact factor: 4.116

2.  Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm.

Authors:  Xuehui Huang; Yan Zhao; Xinghua Wei; Canyang Li; Ahong Wang; Qiang Zhao; Wenjun Li; Yunli Guo; Liuwei Deng; Chuanrang Zhu; Danlin Fan; Yiqi Lu; Qijun Weng; Kunyan Liu; Taoying Zhou; Yufeng Jing; Lizhen Si; Guojun Dong; Tao Huang; Tingting Lu; Qi Feng; Qian Qian; Jiayang Li; Bin Han
Journal:  Nat Genet       Date:  2011-12-04       Impact factor: 38.330

3.  Genome-Wide Association and Transcriptome Analyses Reveal Candidate Genes Underlying Yield-determining Traits in Brassica napus.

Authors:  Kun Lu; Liu Peng; Chao Zhang; Junhua Lu; Bo Yang; Zhongchun Xiao; Ying Liang; Xingfu Xu; Cunmin Qu; Kai Zhang; Liezhao Liu; Qinlong Zhu; Minglian Fu; Xiaoyan Yuan; Jiana Li
Journal:  Front Plant Sci       Date:  2017-02-15       Impact factor: 5.753

4.  Genomic Prediction of Genotypic Effects with Epistasis and Environment Interactions for Yield-Related Traits of Rapeseed (Brassica napus L.).

Authors:  Xiang Luo; Yi Ding; Linzhong Zhang; Yao Yue; John H Snyder; Chaozhi Ma; Jun Zhu
Journal:  Front Genet       Date:  2017-02-21       Impact factor: 4.599

5.  TEF-7A, a transcript elongation factor gene, influences yield-related traits in bread wheat (Triticum aestivum L.).

Authors:  Jun Zheng; Hong Liu; Yuquan Wang; Lanfen Wang; Xiaoping Chang; Ruilian Jing; Chenyang Hao; Xueyong Zhang
Journal:  J Exp Bot       Date:  2014-07-23       Impact factor: 6.992

6.  Efficient DNA fingerprinting based on the targeted sequencing of active retrotransposon insertion sites using a bench-top high-throughput sequencing platform.

Authors:  Yuki Monden; Ayaka Yamamoto; Akiko Shindo; Makoto Tahara
Journal:  DNA Res       Date:  2014-06-16       Impact factor: 4.458

7.  Genome-Wide Association Study for Plant Height and Grain Yield in Rice under Contrasting Moisture Regimes.

Authors:  Xiaosong Ma; Fangjun Feng; Haibin Wei; Hanwei Mei; Kai Xu; Shoujun Chen; Tianfei Li; Xiaohua Liang; Hongyan Liu; Lijun Luo
Journal:  Front Plant Sci       Date:  2016-11-29       Impact factor: 5.753
  7 in total

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