Literature DB >> 20980665

Informatics in radiology: an information model of the DICOM standard.

Charles E Kahn1, Curtis P Langlotz, David S Channin, Daniel L Rubin.   

Abstract

The Digital Imaging and Communications in Medicine (DICOM) Standard is a key foundational technology for radiology. However, its complexity creates challenges for information system developers because the current DICOM specification requires human interpretation and is subject to nonstandard implementation. To address this problem, a formally sound and computationally accessible information model of the DICOM Standard was created. The DICOM Standard was modeled as an ontology, a machine-accessible and human-interpretable representation that may be viewed and manipulated by information-modeling tools. The DICOM Ontology includes a real-world model and a DICOM entity model. The real-world model describes patients, studies, images, and other features of medical imaging. The DICOM entity model describes connections between real-world entities and the classes that model the corresponding DICOM information entities. The DICOM Ontology was created to support the Cancer Biomedical Informatics Grid (caBIG) initiative, and it may be extended to encompass the entire DICOM Standard and serve as a foundation of medical imaging systems for research and patient care. RSNA, 2010

Entities:  

Mesh:

Year:  2010        PMID: 20980665      PMCID: PMC3399709          DOI: 10.1148/rg.311105085

Source DB:  PubMed          Journal:  Radiographics        ISSN: 0271-5333            Impact factor:   5.333


  18 in total

1.  The Gene Ontology (GO) database and informatics resource.

Authors:  M A Harris; J Clark; A Ireland; J Lomax; M Ashburner; R Foulger; K Eilbeck; S Lewis; B Marshall; C Mungall; J Richter; G M Rubin; J A Blake; C Bult; M Dolan; H Drabkin; J T Eppig; D P Hill; L Ni; M Ringwald; R Balakrishnan; J M Cherry; K R Christie; M C Costanzo; S S Dwight; S Engel; D G Fisk; J E Hirschman; E L Hong; R S Nash; A Sethuraman; C L Theesfeld; D Botstein; K Dolinski; B Feierbach; T Berardini; S Mundodi; S Y Rhee; R Apweiler; D Barrell; E Camon; E Dimmer; V Lee; R Chisholm; P Gaudet; W Kibbe; R Kishore; E M Schwarz; P Sternberg; M Gwinn; L Hannick; J Wortman; M Berriman; V Wood; N de la Cruz; P Tonellato; P Jaiswal; T Seigfried; R White
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

Review 2.  Bio-ontologies: current trends and future directions.

Authors:  Olivier Bodenreider; Robert Stevens
Journal:  Brief Bioinform       Date:  2006-08-09       Impact factor: 11.622

3.  The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration.

Authors:  Barry Smith; Michael Ashburner; Cornelius Rosse; Jonathan Bard; William Bug; Werner Ceusters; Louis J Goldberg; Karen Eilbeck; Amelia Ireland; Christopher J Mungall; Neocles Leontis; Philippe Rocca-Serra; Alan Ruttenberg; Susanna-Assunta Sansone; Richard H Scheuermann; Nigam Shah; Patricia L Whetzel; Suzanna Lewis
Journal:  Nat Biotechnol       Date:  2007-11       Impact factor: 54.908

4.  Creating and curating a terminology for radiology: ontology modeling and analysis.

Authors:  Daniel L Rubin
Journal:  J Digit Imaging       Date:  2007-09-15       Impact factor: 4.056

5.  Scaling the walls of discovery: using semantic metadata for integrative problem solving.

Authors:  Maurice Manning; Amit Aggarwal; Kevin Gao; Greg Tucker-Kellogg
Journal:  Brief Bioinform       Date:  2009-03       Impact factor: 11.622

Review 6.  DICOM and radiology: past, present, and future.

Authors:  Charles E Kahn; John A Carrino; Michael J Flynn; Donald J Peck; Steven C Horii
Journal:  J Am Coll Radiol       Date:  2007-09       Impact factor: 5.532

7.  Textpresso: an ontology-based information retrieval and extraction system for biological literature.

Authors:  Hans-Michael Müller; Eimear E Kenny; Paul W Sternberg
Journal:  PLoS Biol       Date:  2004-09-21       Impact factor: 8.029

8.  The Cancer Biomedical Informatics Grid (caBIG): infrastructure and applications for a worldwide research community.

Authors: 
Journal:  Stud Health Technol Inform       Date:  2007

9.  Cancer informatics vision: caBIG.

Authors:  Andrew C von Eschenbach; Kenneth Buetow
Journal:  Cancer Inform       Date:  2007-02-06

10.  Open source software projects of the caBIG In Vivo Imaging Workspace Software special interest group.

Authors:  Fred W Prior; Bradley J Erickson; Lawrence Tarbox
Journal:  J Digit Imaging       Date:  2007-09-11       Impact factor: 4.056

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  5 in total

1.  Workflow Lexicons in Healthcare: Validation of the SWIM Lexicon.

Authors:  Chris Meenan; Bradley Erickson; Nancy Knight; Jewel Fossett; Elizabeth Olsen; Prerna Mohod; Joseph Chen; Steve G Langer
Journal:  J Digit Imaging       Date:  2017-06       Impact factor: 4.056

2.  Biomedical imaging ontologies: A survey and proposal for future work.

Authors:  Barry Smith; Sivaram Arabandi; Mathias Brochhausen; Michael Calhoun; Paolo Ciccarese; Scott Doyle; Bernard Gibaud; Ilya Goldberg; Charles E Kahn; James Overton; John Tomaszewski; Metin Gurcan
Journal:  J Pathol Inform       Date:  2015-06-23

3.  Structured reporting: if, why, when, how-and at what expense? Results of a focus group meeting of radiology professionals from eight countries.

Authors:  J M L Bosmans; L Peremans; M Menni; A M De Schepper; P O Duyck; P M Parizel
Journal:  Insights Imaging       Date:  2012-03-14

4.  Integrating the OHIF Viewer into XNAT: Achievements, Challenges and Prospects for Quantitative Imaging Studies.

Authors:  Simon J Doran; Mohammad Al Sa'd; James A Petts; James Darcy; Kate Alpert; Woonchan Cho; Lorena Escudero Sanchez; Sachidanand Alle; Ahmed El Harouni; Brad Genereaux; Erik Ziegler; Gordon J Harris; Eric O Aboagye; Evis Sala; Dow-Mu Koh; Dan Marcus
Journal:  Tomography       Date:  2022-02-11

5.  Guided endodontic treatment in a region of limited mouth opening: a case report of mandibular molar mesial root canals with dystrophic calcification.

Authors:  Marcos Coelho Santiago; Michel Mattar Altoe; Caroline Piske de Azevedo Mohamed; Laudimar Alves de Oliveira; Loise Pedrosa Salles
Journal:  BMC Oral Health       Date:  2022-02-11       Impact factor: 2.757

  5 in total

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