Literature DB >> 20975222

Time-resolved SAXS measurements facilitated by online HPLC buffer exchange.

Malene Hillerup Jensen1, Katrine Nørgaard Toft, Gabriel David, Svend Havelund, Javier Pérez, Bente Vestergaard.   

Abstract

Small-angle X-ray scattering (SAXS) is a powerful technique to structurally characterize biological macromolecules in solution. Heterogeneous solutions are inherently challenging to study. However, since SAXS data from ideal solutions are additive, with careful computational analysis it may be possible to separate contributions from individual species present in solution. Hence, time-resolved SAXS (TR-SAXS) data of processes in development can be analyzed. Many reported TR-SAXS results are initialized by a sudden change in buffer conditions facilitated by rapid mixing combined with either continuous or stopped flow. In this paper a method for obtaining TR-SAXS data from systems where the reaction is triggered by removal of a species is presented. This method is based on fast buffer exchange over a short desalting column facilitated by an online HPLC (high-performance liquid chromatography) connected to the SAXS sample cell. The sample is stopped in the sample cell and the evolving reaction is followed. In this specific system the removal of phenol initiates a self-association process of long-acting insulin analogues. For this experiment, data were collected in time series while varying concentrations. The method can be generally applied to other systems where removal of a species or other changes in experimental conditions trigger a process.

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Year:  2010        PMID: 20975222     DOI: 10.1107/S0909049510030372

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  9 in total

Review 1.  Emerging applications of small angle solution scattering in structural biology.

Authors:  Barnali N Chaudhuri
Journal:  Protein Sci       Date:  2015-02-12       Impact factor: 6.725

2.  Quaternary structure heterogeneity of oligomeric proteins: a SAXS and SANS study of the dissociation products of Octopus vulgaris hemocyanin.

Authors:  Francesco Spinozzi; Paolo Mariani; Ivan Mičetić; Claudio Ferrero; Diego Pontoni; Mariano Beltramini
Journal:  PLoS One       Date:  2012-11-15       Impact factor: 3.240

3.  Online ion-exchange chromatography for small-angle X-ray scattering.

Authors:  Stephanie Hutin; Martha Brennich; Benoit Maillot; Adam Round
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-09-15       Impact factor: 7.652

4.  Online Size-exclusion and Ion-exchange Chromatography on a SAXS Beamline.

Authors:  Martha E Brennich; Adam R Round; Stephanie Hutin
Journal:  J Vis Exp       Date:  2017-01-05       Impact factor: 1.355

5.  A method for efficient Bayesian optimization of self-assembly systems from scattering data.

Authors:  Marcus Thomas; Russell Schwartz
Journal:  BMC Syst Biol       Date:  2018-06-08

6.  Performance of the new biological small- and wide-angle X-ray scattering beamline 13A at the Taiwan Photon Source.

Authors:  O Shih; K-F Liao; Y-Q Yeh; C-J Su; C-A Wang; J-W Chang; W-R Wu; C-C Liang; C-Y Lin; T-H Lee; C-H Chang; L-C Chiang; C-F Chang; D-G Liu; M-H Lee; C-Y Liu; T-W Hsu; B Mansel; M-C Ho; C-Y Shu; F Lee; E Yen; T-C Lin; U Jeng
Journal:  J Appl Crystallogr       Date:  2022-03-18       Impact factor: 3.304

Review 7.  Beyond simple small-angle X-ray scattering: developments in online complementary techniques and sample environments.

Authors:  Wim Bras; Satoshi Koizumi; Nicholas J Terrill
Journal:  IUCrJ       Date:  2014-09-23       Impact factor: 4.769

8.  New developments in the ATSAS program package for small-angle scattering data analysis.

Authors:  Maxim V Petoukhov; Daniel Franke; Alexander V Shkumatov; Giancarlo Tria; Alexey G Kikhney; Michal Gajda; Christian Gorba; Haydyn D T Mertens; Petr V Konarev; Dmitri I Svergun
Journal:  J Appl Crystallogr       Date:  2012-03-15       Impact factor: 3.304

Review 9.  Progress in small-angle scattering from biological solutions at high-brilliance synchrotrons.

Authors:  Anne T Tuukkanen; Alessandro Spilotros; Dmitri I Svergun
Journal:  IUCrJ       Date:  2017-08-08       Impact factor: 4.769

  9 in total

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