Literature DB >> 20971136

A simple and rapid GC/MS method for the simultaneous determination of gaseous metabolites.

Kazuo Isobe1, Keisuke Koba, Shingo Ueda, Keishi Senoo, Shigeaki Harayama, Yuichi Suwa.   

Abstract

We modified and tuned a commercial model of a gas chromatography/mass spectrometry (GC/MS) instrument to develop a simple and rapid method for the simultaneous quantification of a variety of gas species. Using the developed method with the newly modified instrument, gas species such as H(2), N(2), O(2), CO, NO, CH(4), CO(2), and N(2)O, which are common components of microbial metabolism, were accurately identified based on their retention times and/or mass-to-charge ratios (m/z) in less than 2.5 min. By examining the sensitivities and dynamic ranges for the detection of H(2), N(2), O(2), CH(4), CO(2), and N(2)O, it was demonstrated that the method developed in this study was sufficient for accurately monitoring the production and the consumption of these gaseous species during microbial metabolism. The utility of the new method was demonstrated by a denitrification study with Pseudomonas aureofaciens ATCC 13985(T). This method will be suitable for a variety of applications requiring the identification of gaseous metabolites in microorganisms, microbial communities, and natural ecosystems.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20971136     DOI: 10.1016/j.mimet.2010.10.009

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  8 in total

1.  Higher diversity and abundance of denitrifying microorganisms in environments than considered previously.

Authors:  Wei Wei; Kazuo Isobe; Tomoyasu Nishizawa; Lin Zhu; Yutaka Shiratori; Nobuhito Ohte; Keisuke Koba; Shigeto Otsuka; Keishi Senoo
Journal:  ISME J       Date:  2015-03-10       Impact factor: 10.302

2.  Determination of 15N/14N of Ammonium, Nitrite, Nitrate, Hydroxylamine, and Hydrazine Using Colorimetric Reagents and Matrix-Assisted Laser Desorption Ionization-Time-of-Flight Mass Spectrometry (MALDI-TOF MS).

Authors:  Mamoru Oshiki; Komei Nagai; Satoshi Ishii; Yoshiyuki Suzuki; Nobuo Saito; Takashi Yamaguchi; Nobuo Araki; Satoshi Okabe
Journal:  Appl Environ Microbiol       Date:  2022-03-14       Impact factor: 5.005

3.  Rapid Characterization of Bacterial Lipids with Ambient Ionization Mass Spectrometry for Species Differentiation.

Authors:  Hung Su; Zong-Han Jiang; Shu-Fen Chiou; Jentaie Shiea; Deng-Chyang Wu; Sung-Pin Tseng; Shu-Huei Jain; Chung-Yu Chang; Po-Liang Lu
Journal:  Molecules       Date:  2022-04-26       Impact factor: 4.927

4.  N2O Reduction by Gemmatimonas aurantiaca and Potential Involvement of Gemmatimonadetes Bacteria in N2O Reduction in Agricultural Soils.

Authors:  Mamoru Oshiki; Yuka Toyama; Toshikazu Suenaga; Akihiko Terada; Yasuhiro Kasahara; Takashi Yamaguchi; Nobuo Araki
Journal:  Microbes Environ       Date:  2022       Impact factor: 2.596

5.  NH2OH Disproportionation Mediated by Anaerobic Ammonium-oxidizing (Anammox) Bacteria.

Authors:  Mamoru Oshiki; Lin Gao; Lei Zhang; Satoshi Okabe
Journal:  Microbes Environ       Date:  2022       Impact factor: 2.596

6.  N(2)O emission from degraded soybean nodules depends on denitrification by Bradyrhizobium japonicum and other microbes in the rhizosphere.

Authors:  Shoko Inaba; Fumio Ikenishi; Manabu Itakura; Masakazu Kikuchi; Shima Eda; Naohiko Chiba; Chie Katsuyama; Yuichi Suwa; Hisayuki Mitsui; Kiwamu Minamisawa
Journal:  Microbes Environ       Date:  2012-10-05       Impact factor: 2.912

7.  Dissimilatory Nitrate Reduction to Ammonium and Responsible Microbes in Japanese Rice Paddy Soil.

Authors:  Yosuke Nojiri; Yuka Kaneko; Yoichi Azegami; Yutaka Shiratori; Nobuhito Ohte; Keishi Senoo; Shigeto Otsuka; Kazuo Isobe
Journal:  Microbes Environ       Date:  2020       Impact factor: 2.912

8.  Cell Density-dependent Anammox Activity of Candidatus Brocadia sinica Regulated by N-acyl Homoserine Lactone-mediated Quorum Sensing.

Authors:  Mamoru Oshiki; Haruna Hiraizumi; Hisashi Satoh; Satoshi Okabe
Journal:  Microbes Environ       Date:  2020       Impact factor: 2.912

  8 in total

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