Literature DB >> 35285242

Determination of 15N/14N of Ammonium, Nitrite, Nitrate, Hydroxylamine, and Hydrazine Using Colorimetric Reagents and Matrix-Assisted Laser Desorption Ionization-Time-of-Flight Mass Spectrometry (MALDI-TOF MS).

Mamoru Oshiki1,2, Komei Nagai2,3, Satoshi Ishii3,4, Yoshiyuki Suzuki2, Nobuo Saito5, Takashi Yamaguchi6, Nobuo Araki2, Satoshi Okabe1.   

Abstract

In the nitrogen (N) cycle, nitrogenous compounds are chemically and biologically converted to various aqueous and gaseous N species. The 15N-labeling approach is a powerful culture-dependent technique to obtain insights into the complex nitrogen transformation reactions that occur in cultures. In the 15N-labeling approach, the fates of supplemented 15N- and/or unlabeled gaseous and aqueous compounds are tracked by mass spectrometry (MS) analysis, whereas MS analysis of aqueous N species requires laborious sample preparation steps and is performed using isotope-ratio mass spectrometry, which requires an expensive mass spectrometer. We developed a simple and high-throughput MS method for determining the 15N atoms percent of NH4+, NO2-, NO3-, NH2OH, and N2H4, where liquid samples (<0.5 mL) were mixed with colorimetric reagents (naphthylethylenediamine for NO2-, indophenol for NH4+, and p-aminobenzaldehyde for N2H4), and the mass spectra of the formed N complex dyes were obtained by matrix-assisted laser desorption ionization-time-of-flight (MALDI-TOF) MS. NH2OH and NO3- were chemically converted to NO2- by iodine oxidation and copper/hydrazine reduction reaction, respectively, prior to the above colorimetric reaction. The intensity of the isotope peak (M + 1 or M + 2) increased when the N complex dye was formed by coupling with a 15N-labeled compound, and a linear relationship was found between the determined 15N/14N peak ratio and 15N atom% for the tested N species. The developed method was applied to bacterial cultures to examine their N-transformation reactions, enabling us to observe the occurrence of NO2- oxidation and NO3- reduction in a hypoxic Nitrobacter winogradskyi culture. IMPORTANCE15N/14N analysis for aqueous N species is a powerful tool for obtaining insights into the global N cycle, but the procedure is cumbersome and laborious. The combined use of colorimetric reagents and MALDI-TOF MS, designated color MALDI-TOF MS, enabled us to determine the 15N atom% of common aqueous N species without laborious sample preparation and chromatographic separation steps; for instance, the 15N atom% of NO2- can be determined from >1,000 liquid samples daily at <$1 (U.S.) per 384 samples for routine analysis. This convenient MS method is a powerful tool that will advance our ability to explore the N-transformation reactions that occur in various environments and biological samples.

Entities:  

Keywords:  15N atom%; MALDI-TOF MS; colorimetric reagent; mass spectrometry; nitrogen cycle; nitrogen isotope

Mesh:

Substances:

Year:  2022        PMID: 35285242      PMCID: PMC9004403          DOI: 10.1128/aem.02416-21

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   5.005


  44 in total

1.  Distribution and diversity of anaerobic ammonium oxidation (anammox) bacteria in the sediment of a eutrophic freshwater lake, Lake Kitaura, Japan.

Authors:  Ikuo Yoshinaga; Teruki Amano; Takao Yamagishi; Kentaro Okada; Shingo Ueda; Yoshihiko Sako; Yuichi Suwa
Journal:  Microbes Environ       Date:  2011-05-11       Impact factor: 2.912

2.  Ubiquity and Diversity of Complete Ammonia Oxidizers (Comammox).

Authors:  Fei Xia; Jian-Gong Wang; Ting Zhu; Bin Zou; Sung-Keun Rhee; Zhe-Xue Quan
Journal:  Appl Environ Microbiol       Date:  2018-11-30       Impact factor: 4.792

Review 3.  Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation.

Authors:  James I Prosser; Graeme W Nicol
Journal:  Trends Microbiol       Date:  2012-09-07       Impact factor: 17.079

Review 4.  Physiology and diversity of ammonia-oxidizing archaea.

Authors:  David A Stahl; José R de la Torre
Journal:  Annu Rev Microbiol       Date:  2012       Impact factor: 15.500

5.  Gas chromatographic-mass spectrometric analysis of hydroxylamine for monitoring the metabolic hydrolysis of metalloprotease inhibitors in rat and human liver microsomes.

Authors:  S X Peng; M J Strojnowski; J K Hu; B J Smith; T H Eichhold; K R Wehmeyer; S Pikul; N G Almstead
Journal:  J Chromatogr B Biomed Sci Appl       Date:  1999-03-05

6.  Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California.

Authors:  J Michael Beman; Brian N Popp; Christopher A Francis
Journal:  ISME J       Date:  2008-01-17       Impact factor: 10.302

7.  Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions.

Authors:  Barbara Bayer; Mak A Saito; Matthew R McIlvin; Sebastian Lücker; Dawn M Moran; Thomas S Lankiewicz; Christopher L Dupont; Alyson E Santoro
Journal:  ISME J       Date:  2020-11-23       Impact factor: 10.302

8.  Draft Genome Sequence of an Anaerobic Ammonium-Oxidizing Bacterium, "Candidatus Brocadia sinica".

Authors:  Mamoru Oshiki; Kaori Shinyako-Hata; Hisashi Satoh; Satoshi Okabe
Journal:  Genome Announc       Date:  2015-04-16

9.  Alternative strategies of nutrient acquisition and energy conservation map to the biogeography of marine ammonia-oxidizing archaea.

Authors:  Wei Qin; Yue Zheng; Feng Zhao; Yulin Wang; Hidetoshi Urakawa; Willm Martens-Habbena; Haodong Liu; Xiaowu Huang; Xinxu Zhang; Tatsunori Nakagawa; Daniel R Mende; Annette Bollmann; Baozhan Wang; Yao Zhang; Shady A Amin; Jeppe L Nielsen; Koji Mori; Reiji Takahashi; E Virginia Armbrust; Mari-K H Winkler; Edward F DeLong; Meng Li; Po-Heng Lee; Jizhong Zhou; Chuanlun Zhang; Tong Zhang; David A Stahl; Anitra E Ingalls
Journal:  ISME J       Date:  2020-07-07       Impact factor: 10.302

10.  Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genus Nitrospira.

Authors:  Hanna Koch; Sebastian Lücker; Mads Albertsen; Katharina Kitzinger; Craig Herbold; Eva Spieck; Per Halkjaer Nielsen; Michael Wagner; Holger Daims
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-24       Impact factor: 11.205

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