Literature DB >> 20958255

Ultrahigh-throughput screening system for directed glucose oxidase evolution in yeast cells.

Radivoje Prodanovic1, Raluca Ostafe, Andreea Scacioc, Ulrich Schwaneberg.   

Abstract

A compartmentalized tyramide labeling system (CoaTi) employing flow cytometry for sorting of yeast cells was developed as ultrahigh-throughput screening for Glucose oxidase (GOx) from Aspergillus niger. CoaTi combines in vitro compartmentalization technology with the CARD reporter system which uses fluorescein tyramide labels for detection of peroxidase activity. Physical connection between cells and fluorescein tyramide radicals was achieved by compartmentalization of yeast cells inside microdroplets of single water-in-oil emulsions. After reaction cells were recovered from single emulsions and sorted by flow cytometry, an error prone PCR mutant library of Glucose oxidase (GOx) containing 10(7) cells and ~10(5) of different GOx variants was screened. Mutagenic conditions of GOx mutant library were selected to generate <1 % of active GOx population in order to explore influence of high mutation frequency on GOx activity. GOx variant Mut12 that contains 5 mutations (N2Y, K13E, T30V, I94V, K152R) showed a 1.2 times decreased K(m) (22.0 vs 18.1 mM) and a 2.7 fold increased k(cat) (150 s(-1) vs 54.8 s(-1)) compared to wt GOx. Compared to the employed parent B11 GOx (16 mM, 80 s(-1)) it has a slightly increased K(m) and 1.8 times increased k(cat).

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Year:  2011        PMID: 20958255     DOI: 10.2174/1386207311107010055

Source DB:  PubMed          Journal:  Comb Chem High Throughput Screen        ISSN: 1386-2073            Impact factor:   1.339


  9 in total

1.  Cloning, heterologous expression, purification and characterization of M12 mutant of Aspergillus niger glucose oxidase in yeast Pichia pastoris KM71H.

Authors:  Gordana Kovačević; Marija Blažić; Bojana Draganić; Raluca Ostafe; Marija Gavrović-Jankulović; Rainer Fischer; Radivoje Prodanović
Journal:  Mol Biotechnol       Date:  2014-04       Impact factor: 2.695

2.  A high-throughput cellulase screening system based on droplet microfluidics.

Authors:  Raluca Ostafe; Radivoje Prodanovic; W Lloyd Ung; David A Weitz; Rainer Fischer
Journal:  Biomicrofluidics       Date:  2014-07-02       Impact factor: 2.800

Review 3.  Improvement Strategies, Cost Effective Production, and Potential Applications of Fungal Glucose Oxidase (GOD): Current Updates.

Authors:  Manish K Dubey; Andleeb Zehra; Mohd Aamir; Mukesh Meena; Laxmi Ahirwal; Siddhartha Singh; Shruti Shukla; Ram S Upadhyay; Ruben Bueno-Mari; Vivek K Bajpai
Journal:  Front Microbiol       Date:  2017-06-13       Impact factor: 5.640

4.  A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries.

Authors:  Radivoje Prodanović; W Lloyd Ung; Karla Ilić Đurđić; Rainer Fischer; David A Weitz; Raluca Ostafe
Journal:  Molecules       Date:  2020-05-22       Impact factor: 4.411

5.  Construction of mutant glucose oxidases with increased dye-mediated dehydrogenase activity.

Authors:  Yohei Horaguchi; Shoko Saito; Katsuhiro Kojima; Wakako Tsugawa; Stefano Ferri; Koji Sode
Journal:  Int J Mol Sci       Date:  2012-11-02       Impact factor: 5.923

6.  In vitro flow cytometry-based screening platform for cellulase engineering.

Authors:  Georgette Körfer; Christian Pitzler; Ljubica Vojcic; Ronny Martinez; Ulrich Schwaneberg
Journal:  Sci Rep       Date:  2016-05-17       Impact factor: 4.379

7.  A High-Throughput Screening System Based on Fluorescence-Activated Cell Sorting for the Directed Evolution of Chitinase A.

Authors:  Gheorghita Menghiu; Vasile Ostafe; Radivoje Prodanović; Rainer Fischer; Raluca Ostafe
Journal:  Int J Mol Sci       Date:  2021-03-16       Impact factor: 5.923

Review 8.  Droplet Microfluidics and Directed Evolution of Enzymes: An Intertwined Journey.

Authors:  Ariane Stucki; Jaicy Vallapurackal; Thomas R Ward; Petra S Dittrich
Journal:  Angew Chem Int Ed Engl       Date:  2021-07-16       Impact factor: 15.336

Review 9.  High-throughput screening, next generation sequencing and machine learning: advanced methods in enzyme engineering.

Authors:  Rosario Vanella; Gordana Kovacevic; Vanni Doffini; Jaime Fernández de Santaella; Michael A Nash
Journal:  Chem Commun (Camb)       Date:  2022-02-17       Impact factor: 6.222

  9 in total

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