Literature DB >> 20951026

Recognition of nuclear targeting signals by Karyopherin-β proteins.

Darui Xu1, Alicia Farmer, Yuh Min Chook.   

Abstract

The Karyopherin-β family of nuclear transport factors mediates the majority of nucleocytoplasmic transport. Although each of the 19 Karyopherin-βs transports unique sets of cargos, only three classes of nuclear localization and export signals, or NLSs and NESs, have been characterized. The short basic classical-NLS was first discovered in the 1980s and their karyopherin-bound structures were first reported more than 10 years ago. More recently, structural and biophysical studies of Karyopherin-β2-cargo complexes led to definition of the complex and diverse PY-NLS. Structural knowledge of the leucine-rich NES is finally available more than 10 years after the discovery of its recognition by the exportin CRM1. We review recent findings relating to how these three classes of nuclear targeting signals are recognized by their Karyopherin-β nuclear transport factors.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20951026      PMCID: PMC2994982          DOI: 10.1016/j.sbi.2010.09.008

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  60 in total

1.  Exportin 1 (Crm1p) is an essential nuclear export factor.

Authors:  K Stade; C S Ford; C Guthrie; K Weis
Journal:  Cell       Date:  1997-09-19       Impact factor: 41.582

2.  Structure-based design of a pathway-specific nuclear import inhibitor.

Authors:  Ahmet E Cansizoglu; Brittany J Lee; Zi Chao Zhang; Beatriz M A Fontoura; Yuh Min Chook
Journal:  Nat Struct Mol Biol       Date:  2007-04-15       Impact factor: 15.369

3.  Evidence for a role of CRM1 in signal-mediated nuclear protein export.

Authors:  B Ossareh-Nazari; F Bachelerie; C Dargemont
Journal:  Science       Date:  1997-10-03       Impact factor: 47.728

4.  CRM1 is an export receptor for leucine-rich nuclear export signals.

Authors:  M Fornerod; M Ohno; M Yoshida; I W Mattaj
Journal:  Cell       Date:  1997-09-19       Impact factor: 41.582

5.  Protein sequence requirements for function of the human T-cell leukemia virus type 1 Rex nuclear export signal delineated by a novel in vivo randomization-selection assay.

Authors:  H P Bogerd; R A Fridell; R E Benson; J Hua; B R Cullen
Journal:  Mol Cell Biol       Date:  1996-08       Impact factor: 4.272

6.  A novel receptor-mediated nuclear protein import pathway.

Authors:  V W Pollard; W M Michael; S Nakielny; M C Siomi; F Wang; G Dreyfuss
Journal:  Cell       Date:  1996-09-20       Impact factor: 41.582

7.  Karyopherin beta2 mediates nuclear import of a mRNA binding protein.

Authors:  N Bonifaci; J Moroianu; A Radu; G Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-13       Impact factor: 11.205

8.  CRM1-mediated nuclear export: to the pore and beyond.

Authors:  Saskia Hutten; Ralph H Kehlenbach
Journal:  Trends Cell Biol       Date:  2007-02-20       Impact factor: 20.808

Review 9.  Classical nuclear localization signals: definition, function, and interaction with importin alpha.

Authors:  Allison Lange; Ryan E Mills; Christopher J Lange; Murray Stewart; Scott E Devine; Anita H Corbett
Journal:  J Biol Chem       Date:  2006-12-14       Impact factor: 5.157

10.  Transportin-mediated nuclear import of heterogeneous nuclear RNP proteins.

Authors:  M C Siomi; P S Eder; N Kataoka; L Wan; Q Liu; G Dreyfuss
Journal:  J Cell Biol       Date:  1997-09-22       Impact factor: 10.539

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  105 in total

1.  Host cell interactome of HIV-1 Rev includes RNA helicases involved in multiple facets of virus production.

Authors:  Souad Naji; Géza Ambrus; Peter Cimermančič; Jason R Reyes; Jeffrey R Johnson; Rebecca Filbrandt; Michael D Huber; Paul Vesely; Nevan J Krogan; John R Yates; Andrew C Saphire; Larry Gerace
Journal:  Mol Cell Proteomics       Date:  2011-12-15       Impact factor: 5.911

2.  Nucleocytoplasmic transport: a role for nonspecific competition in karyopherin-nucleoporin interactions.

Authors:  Jaclyn Tetenbaum-Novatt; Loren E Hough; Roxana Mironska; Anna Sophia McKenney; Michael P Rout
Journal:  Mol Cell Proteomics       Date:  2012-02-22       Impact factor: 5.911

3.  Structural and energetic basis of ALS-causing mutations in the atypical proline-tyrosine nuclear localization signal of the Fused in Sarcoma protein (FUS).

Authors:  Zi Chao Zhang; Yuh Min Chook
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-09       Impact factor: 11.205

4.  Critical role of N-terminal end-localized nuclear export signal in regulation of activating transcription factor 2 (ATF2) subcellular localization and transcriptional activity.

Authors:  Chih-Chao Hsu; Chang-Deng Hu
Journal:  J Biol Chem       Date:  2012-01-24       Impact factor: 5.157

5.  Piggybacking on Classical Import and Other Non-Classical Mechanisms of Nuclear Import Appear Highly Prevalent within the Human Proteome.

Authors:  Tanner M Tessier; Katelyn M MacNeil; Joe S Mymryk
Journal:  Biology (Basel)       Date:  2020-07-23

Review 6.  Nuclear export mediated regulation of microRNAs: potential target for drug intervention.

Authors:  Irfana Muqbil; Bin Bao; Abdul Badi Abou-Samra; Ramzi M Mohammad; Asfar S Azmi
Journal:  Curr Drug Targets       Date:  2013-09       Impact factor: 3.465

7.  Histone chaperones link histone nuclear import and chromatin assembly.

Authors:  Kristin M Keck; Lucy F Pemberton
Journal:  Biochim Biophys Acta       Date:  2011-10-08

8.  Interaction domains and nuclear targeting signals in subunits of the U2 small nuclear ribonucleoprotein particle-associated splicing factor SF3a.

Authors:  Ching-Jung Huang; Fabio Ferfoglia; Flore Raleff; Angela Krämer
Journal:  J Biol Chem       Date:  2011-02-24       Impact factor: 5.157

9.  Selective inhibitors of nuclear export show that CRM1/XPO1 is a target in chronic lymphocytic leukemia.

Authors:  Rosa Lapalombella; Qingxiang Sun; Katie Williams; Larissa Tangeman; Shruti Jha; Yiming Zhong; Virginia Goettl; Emilia Mahoney; Caroline Berglund; Sneha Gupta; Alicia Farmer; Rajeswaran Mani; Amy J Johnson; David Lucas; Xiaokui Mo; Dirk Daelemans; Vincent Sandanayaka; Sharon Shechter; Dilara McCauley; Sharon Shacham; Michael Kauffman; Yuh Min Chook; John C Byrd
Journal:  Blood       Date:  2012-10-03       Impact factor: 22.113

10.  Crystal structure of human Karyopherin β2 bound to the PY-NLS of Saccharomyces cerevisiae Nab2.

Authors:  Michael Soniat; Parthasarathy Sampathkumar; Garen Collett; Anthony S Gizzi; Radhika N Banu; Rahul C Bhosle; Swetha Chamala; Sukanya Chowdhury; Andras Fiser; Alan S Glenn; James Hammonds; Brandan Hillerich; Kamil Khafizov; James D Love; Bridget Matikainen; Ronald D Seidel; Rafael Toro; P Rajesh Kumar; Jeffery B Bonanno; Yuh Min Chook; Steven C Almo
Journal:  J Struct Funct Genomics       Date:  2013-03-28
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