Literature DB >> 20948543

Crystal structure of zinc-finger domain of Nanos and its functional implications.

Hiroshi Hashimoto1, Kodai Hara, Asami Hishiki, Shigeta Kawaguchi, Naoki Shichijo, Keishi Nakamura, Satoru Unzai, Yutaka Tamaru, Toshiyuki Shimizu, Mamoru Sato.   

Abstract

Nanos is an RNA-binding protein that is involved in the development and maintenance of germ cells. In combination with Pumilio, Nanos binds to the 3' untranslated region of a messenger RNA and represses its translation. Nanos has two conserved Cys-Cys-His-Cys zinc-finger motifs that are indispensable for its function. In this study, we have determined the crystal structure of the zinc-finger domain of zebrafish Nanos, for the first time revealing that Nanos adopts a novel zinc-finger structure. In addition, Nanos has a conserved basic surface that is directly involved in RNA binding. Our results provide the structural basis for further studies to clarify Nanos function.

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Year:  2010        PMID: 20948543      PMCID: PMC2966957          DOI: 10.1038/embor.2010.155

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  35 in total

Review 1.  Comparative protein structure modeling of genes and genomes.

Authors:  M A Martí-Renom; A C Stuart; A Fiser; R Sánchez; F Melo; A Sali
Journal:  Annu Rev Biophys Biomol Struct       Date:  2000

2.  Structure of the DNA binding domain of E. coli SSB bound to ssDNA.

Authors:  S Raghunathan; A G Kozlov; T M Lohman; G Waksman
Journal:  Nat Struct Biol       Date:  2000-08

Review 3.  The power of the 3' UTR: translational control and development.

Authors:  Scott Kuersten; Elizabeth B Goodwin
Journal:  Nat Rev Genet       Date:  2003-08       Impact factor: 53.242

4.  A selective screen reveals discrete functional domains in Drosophila Nanos.

Authors:  G Arrizabalaga; R Lehmann
Journal:  Genetics       Date:  1999-12       Impact factor: 4.562

5.  A zebrafish nanos-related gene is essential for the development of primordial germ cells.

Authors:  M Köprunner; C Thisse; B Thisse; E Raz
Journal:  Genes Dev       Date:  2001-11-01       Impact factor: 11.361

6.  Maternal Pumilio acts together with Nanos in germline development in Drosophila embryos.

Authors:  M Asaoka-Taguchi; M Yamada; A Nakamura; K Hanyu; S Kobayashi
Journal:  Nat Cell Biol       Date:  1999-11       Impact factor: 28.824

7.  nanos1: a mouse nanos gene expressed in the central nervous system is dispensable for normal development.

Authors:  Seiki Haraguchi; Masayuki Tsuda; Satoshi Kitajima; Yumiko Sasaoka; Aya Nomura-Kitabayashid; Kiyoshi Kurokawa; Yumiko Saga
Journal:  Mech Dev       Date:  2003-06       Impact factor: 1.882

8.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

9.  Conserved role of nanos proteins in germ cell development.

Authors:  Masayuki Tsuda; Yumiko Sasaoka; Makoto Kiso; Kuniya Abe; Seiki Haraguchi; Satoru Kobayashi; Yumiko Saga
Journal:  Science       Date:  2003-08-29       Impact factor: 47.728

10.  Maximum-likelihood density modification.

Authors:  T C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-08
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  16 in total

1.  Xenopus Nanos1 is required to prevent endoderm gene expression and apoptosis in primordial germ cells.

Authors:  Fangfang Lai; Amar Singh; Mary Lou King
Journal:  Development       Date:  2012-03-07       Impact factor: 6.868

2.  Preparation of cooperative RNA recognition complexes for crystallographic structural studies.

Authors:  Chen Qiu; Aaron C Goldstrohm; Traci M Tanaka Hall
Journal:  Methods Enzymol       Date:  2019-05-02       Impact factor: 1.600

Review 3.  The diversity of nanos expression in echinoderm embryos supports different mechanisms in germ cell specification.

Authors:  Tara Fresques; Steven Zachary Swartz; Celina Juliano; Yoshiaki Morino; Mani Kikuchi; Koji Akasaka; Hiroshi Wada; Mamiko Yajima; Gary M Wessel
Journal:  Evol Dev       Date:  2016-07       Impact factor: 1.930

4.  The molecular basis of LST-1 self-renewal activity and its control of stem cell pool size.

Authors:  Kimberly A Haupt; Amy L Enright; Ahlan S Ferdous; Aaron M Kershner; Heaji Shin; Marvin Wickens; Judith Kimble
Journal:  Development       Date:  2019-10-17       Impact factor: 6.868

Review 5.  The Xenopus Maternal-to-Zygotic Transition from the Perspective of the Germline.

Authors:  Jing Yang; Tristan Aguero; Mary Lou King
Journal:  Curr Top Dev Biol       Date:  2015-08-21       Impact factor: 4.897

6.  Molecular characterization and expression profile of nanos in Schistosoma japonicum and its influence on the expression several mammalian stem cell factors.

Authors:  Bikash Ranjan Giri; Xiaoli Du; Tianqi Xia; Yongjun Chen; Hao Li; Guofeng Cheng
Journal:  Parasitol Res       Date:  2017-05-30       Impact factor: 2.289

7.  Primordial germ cell identification and traceability during the initial development of the Siluriformes fish Pseudopimelodus mangurus.

Authors:  Gustavo Fonseca Shiguemoto; Geovanna Carla Zacheo Coelho; Lucia Suárez López; Giselle Pessanha Pessoa; Silvio Carlos Alves Dos Santos; José Augusto Senhorini; Paulo Sérgio Monzani; George Shigueki Yasui
Journal:  Fish Physiol Biochem       Date:  2022-08-04       Impact factor: 3.014

8.  Differential Nanos 2 protein stability results in selective germ cell accumulation in the sea urchin.

Authors:  Nathalie Oulhen; Gary M Wessel
Journal:  Dev Biol       Date:  2016-07-14       Impact factor: 3.582

Review 9.  Every which way--nanos gene regulation in echinoderms.

Authors:  Nathalie Oulhen; Gary M Wessel
Journal:  Genesis       Date:  2014-01-17       Impact factor: 2.487

10.  Dead end1 is an essential partner of NANOS2 for selective binding of target RNAs in male germ cell development.

Authors:  Atsushi Suzuki; Yuki Niimi; Kaori Shinmyozu; Zhi Zhou; Makoto Kiso; Yumiko Saga
Journal:  EMBO Rep       Date:  2015-11-20       Impact factor: 8.807

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