Literature DB >> 20935086

Rhabdothermus arcticus gen. nov., sp. nov., a member of the family Thermaceae isolated from a hydrothermal vent chimney in the Soria Moria vent field on the Arctic Mid-Ocean Ridge.

Bjørn O Steinsbu1,2, Brian J Tindall3, Vigdis L Torsvik4,2, Ingunn H Thorseth1,2, Frida L Daae4,2, Rolf B Pedersen1,2.   

Abstract

A novel thermophilic member of the family Thermaceae, designated strain 2M70-1(T), was isolated from the wall of an active white smoker chimney collected in the Soria Moria vent field at 71 °N in the Norwegian-Greenland Sea. Cells of the strain were Gram-negative, non-motile rods. Growth was observed at 37-75 °C (optimum 65 °C), at pH 6-8 (optimum pH 7.3) and in 1-5 % (w/v) NaCl (optimum 2.5-3.5 %). The isolate was aerobic but could also grow anaerobically using nitrate or elemental sulfur as electron acceptors. The strain was obligately heterotrophic, growing on complex organic substrates like yeast extract, Casamino acids, tryptone and peptone. Pyruvate, acetate, butyrate, sucrose, rhamnose and maltodextrin were used as complementary substrates. The G+C content of the genomic DNA was 68 mol%. Cells possessed characteristic phospholipids and glycolipids. Major fatty acids constituted saturated and unsaturated iso-branched and saturated anteiso-branched forms. Menaquinone 8 was the sole respiratory lipoquinone. Phylogenetic analysis of 16S rRNA gene sequences placed the strain in the family Thermaceae in the phylum 'Deinococcus-Thermus', which is consistent with the chemotaxonomic data. On the basis of phenotypic and phylogenetic data, strain 2M70-1(T) ( = JCM 15963(T)  = DSM 22268(T)) represents the type strain of a novel species of a novel genus, for which the name Rhabdothermus arcticus gen. nov., sp. nov. is proposed.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20935086     DOI: 10.1099/ijs.0.027839-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Complete genome sequence of Oceanithermus profundus type strain (506).

Authors:  Amrita Pati; Xiaojing Zhang; Alla Lapidus; Matt Nolan; Susan Lucas; Tijana Glavina Del Rio; Hope Tice; Jan-Fang Cheng; Roxane Tapia; Cliff Han; Lynne Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Ivanova; Konstantinos Mavromatis; Amy Chen; Krishna Palaniappan; Loren Hauser; Cynthia D Jeffries; Evelyne-Marie Brambilla; Alina Röhl; Romano Mwirichia; Manfred Rohde; Brian J Tindall; Johannes Sikorski; Reinhard Wirth; Markus Göker; Tanja Woyke; John C Detter; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Miriam Land
Journal:  Stand Genomic Sci       Date:  2011-04-29

2.  Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney.

Authors:  Alex Copeland; Wei Gu; Montri Yasawong; Alla Lapidus; Susan Lucas; Shweta Deshpande; Ioanna Pagani; Roxanne Tapia; Jan-Fang Cheng; Lynne A Goodwin; Sam Pitluck; Konstantinos Liolios; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Chongle Pan; Evelyne-Marie Brambilla; Manfred Rohde; Brian J Tindall; Johannes Sikorski; Markus Göker; John C Detter; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Tanja Woyke
Journal:  Stand Genomic Sci       Date:  2012-03-05

3.  Bacterial and archaeal diversity in an iron-rich coastal hydrothermal field in Yamagawa, Kagoshima, Japan.

Authors:  Satoshi Kawaichi; Norihiro Ito; Takashi Yoshida; Yoshihiko Sako
Journal:  Microbes Environ       Date:  2013-11-21       Impact factor: 2.912

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.