Literature DB >> 20933091

Semi-supervised cluster analysis of imaging data.

Roman Filipovych1, Susan M Resnick, Christos Davatzikos.   

Abstract

In this paper, we present a semi-supervised clustering-based framework for discovering coherent subpopulations in heterogeneous image sets. Our approach involves limited supervision in the form of labeled instances from two distributions that reflect a rough guess about subspace of features that are relevant for cluster analysis. By assuming that images are defined in a common space via registration to a common template, we propose a segmentation-based method for detecting locations that signify local regional differences in the two labeled sets. A PCA model of local image appearance is then estimated at each location of interest, and ranked with respect to its relevance for clustering. We develop an incremental k-means-like algorithm that discovers novel meaningful categories in a test image set. The application of our approach in this paper is in analysis of populations of healthy older adults. We validate our approach on a synthetic dataset, as well as on a dataset of brain images of older adults. We assess our method's performance on the problem of discovering clusters of MR images of human brain, and present a cluster-based measure of pathology that reflects the deviation of a subject's MR image from normal (i.e. cognitively stable) state. We analyze the clusters' structure, and show that clustering results obtained using our approach correlate well with clinical data.
Copyright © 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20933091      PMCID: PMC3008313          DOI: 10.1016/j.neuroimage.2010.09.074

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  16 in total

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Authors:  D L Pham; J L Prince
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4.  HAMMER: hierarchical attribute matching mechanism for elastic registration.

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5.  Baseline and longitudinal patterns of brain atrophy in MCI patients, and their use in prediction of short-term conversion to AD: results from ADNI.

Authors:  Chandan Misra; Yong Fan; Christos Davatzikos
Journal:  Neuroimage       Date:  2008-11-05       Impact factor: 6.556

6.  Voxel-based morphometry using the RAVENS maps: methods and validation using simulated longitudinal atrophy.

Authors:  C Davatzikos; A Genc; D Xu; S M Resnick
Journal:  Neuroimage       Date:  2001-12       Impact factor: 6.556

7.  Amnestic MCI future clinical status prediction using baseline MRI features.

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Review 8.  The neurobiological basis of autism from a developmental perspective.

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Journal:  Dev Psychopathol       Date:  2002

9.  Longitudinal progression of Alzheimer's-like patterns of atrophy in normal older adults: the SPARE-AD index.

Authors:  Christos Davatzikos; Feng Xu; Yang An; Yong Fan; Susan M Resnick
Journal:  Brain       Date:  2009-05-04       Impact factor: 13.501

10.  Automatic classification of MR scans in Alzheimer's disease.

Authors:  Stefan Klöppel; Cynthia M Stonnington; Carlton Chu; Bogdan Draganski; Rachael I Scahill; Jonathan D Rohrer; Nick C Fox; Clifford R Jack; John Ashburner; Richard S J Frackowiak
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  12 in total

1.  Domain Transfer Learning for MCI Conversion Prediction.

Authors:  Bo Cheng; Mingxia Liu; Daoqiang Zhang; Brent C Munsell; Dinggang Shen
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2.  Deep Multiview Learning to Identify Population Structure with Multimodal Imaging.

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Journal:  Proc IEEE Int Symp Bioinformatics Bioeng       Date:  2020-12-16

3.  Multimodal manifold-regularized transfer learning for MCI conversion prediction.

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4.  JointMMCC: joint maximum-margin classification and clustering of imaging data.

Authors:  Roman Filipovych; Susan M Resnick; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2012-02-06       Impact factor: 10.048

5.  Domain transfer learning for MCI conversion prediction.

Authors:  Bo Cheng; Daoqiang Zhang; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

6.  Identifying sub-populations via unsupervised cluster analysis on multi-edge similarity graphs.

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7.  Pattern Analysis in Neuroimaging: Beyond Two-Class Categorization.

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Journal:  Int J Imaging Syst Technol       Date:  2011-05-10       Impact factor: 2.000

8.  Machine learning in neuroimaging: Progress and challenges.

Authors:  Christos Davatzikos
Journal:  Neuroimage       Date:  2018-10-06       Impact factor: 6.556

Review 9.  Diagnostic neuroimaging across diseases.

Authors:  Stefan Klöppel; Ahmed Abdulkadir; Clifford R Jack; Nikolaos Koutsouleris; Janaina Mourão-Miranda; Prashanthi Vemuri
Journal:  Neuroimage       Date:  2011-11-07       Impact factor: 6.556

10.  Semi-Supervised Fuzzy Clustering with Feature Discrimination.

Authors:  Longlong Li; Jonathan M Garibaldi; Dongjian He; Meili Wang
Journal:  PLoS One       Date:  2015-09-01       Impact factor: 3.240

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