Literature DB >> 20931260

Current approaches to exploit actinomycetes as a source of novel natural products.

Olga Genilloud1, Ignacio González, Oscar Salazar, Jesus Martín, José Rubén Tormo, Francisca Vicente.   

Abstract

For decades, microbial natural products have been one of the major sources of novel drugs for pharmaceutical companies, and today all evidence suggests that novel molecules with potential therapeutic applications are still waiting to be discovered from these natural sources, especially from actinomycetes. Any appropriate exploitation of the chemical diversity of these microbial sources relies on proper understanding of their biological diversity and other related key factors that maximize the possibility of successful identification of novel molecules. Without doubt, the discovery of platensimycin has shown that microbial natural products can continue to deliver novel scaffolds if appropriate tools are put in place to reveal them in a cost-effective manner. Whereas today innovative technologies involving exploitation of uncultivated environmental diversity, together with chemical biology and in silico approaches, are seeing rapid development in natural products research, maximization of the chances of exploiting chemical diversity from microbial collections is still essential for novel drug discovery. This work provides an overview of the integrated approaches developed at the former Basic Research Center of Merck Sharp and Dohme in Spain to exploit the diversity and biosynthetic potential of actinomycetes, and includes some examples of those that were successfully applied to the discovery of novel antibiotics.

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Year:  2010        PMID: 20931260     DOI: 10.1007/s10295-010-0882-7

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  73 in total

Review 1.  How many antibiotics are produced by the genus Streptomyces?

Authors:  M G Watve; R Tickoo; M M Jog; B D Bhole
Journal:  Arch Microbiol       Date:  2001-11       Impact factor: 2.552

Review 2.  Bioactive microbial metabolites.

Authors:  János Bérdy
Journal:  J Antibiot (Tokyo)       Date:  2005-01       Impact factor: 2.649

3.  Real-time PCR for the detection and quantification of geodermatophilaceae from stone samples and identification of new members of the genus blastococcus.

Authors:  Oscar Salazar; Aranzazu Valverde; Olga Genilloud
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

4.  Genome-based phylogenetic analysis of Streptomyces and its relatives.

Authors:  Mohammad Tauqeer Alam; Maria Elena Merlo; Eriko Takano; Rainer Breitling
Journal:  Mol Phylogenet Evol       Date:  2009-12-03       Impact factor: 4.286

Review 5.  Genomic basis for natural product biosynthetic diversity in the actinomycetes.

Authors:  Markus Nett; Haruo Ikeda; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2009-09-01       Impact factor: 13.423

6.  Platensimycin is a selective FabF inhibitor with potent antibiotic properties.

Authors:  Jun Wang; Stephen M Soisson; Katherine Young; Wesley Shoop; Srinivas Kodali; Andrew Galgoci; Ronald Painter; Gopalakrishnan Parthasarathy; Yui S Tang; Richard Cummings; Sookhee Ha; Karen Dorso; Mary Motyl; Hiranthi Jayasuriya; John Ondeyka; Kithsiri Herath; Chaowei Zhang; Lorraine Hernandez; John Allocco; Angela Basilio; José R Tormo; Olga Genilloud; Francisca Vicente; Fernando Pelaez; Lawrence Colwell; Sang Ho Lee; Bruce Michael; Thomas Felcetto; Charles Gill; Lynn L Silver; Jeffery D Hermes; Ken Bartizal; John Barrett; Dennis Schmatz; Joseph W Becker; Doris Cully; Sheo B Singh
Journal:  Nature       Date:  2006-05-18       Impact factor: 49.962

7.  Cloning and characterization of new glycopeptide gene clusters found in an environmental DNA megalibrary.

Authors:  Jacob J Banik; Sean F Brady
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-05       Impact factor: 11.205

8.  Discovery of platencin, a dual FabF and FabH inhibitor with in vivo antibiotic properties.

Authors:  Jun Wang; Srinivas Kodali; Sang Ho Lee; Andrew Galgoci; Ronald Painter; Karen Dorso; Fred Racine; Mary Motyl; Lorraine Hernandez; Elizabeth Tinney; Steven L Colletti; Kithsiri Herath; Richard Cummings; Oscar Salazar; Ignacio González; Angela Basilio; Francisca Vicente; Olga Genilloud; Fernando Pelaez; Hiranthi Jayasuriya; Katherine Young; Doris F Cully; Sheo B Singh
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-24       Impact factor: 11.205

9.  Engineered Streptomyces platensis strains that overproduce antibiotics platensimycin and platencin.

Authors:  Michael J Smanski; Ryan M Peterson; Scott R Rajski; Ben Shen
Journal:  Antimicrob Agents Chemother       Date:  2009-01-21       Impact factor: 5.191

10.  Pre-fractionated microbial samples--the second generation natural products library at Wyeth.

Authors:  Melissa M Wagenaar
Journal:  Molecules       Date:  2008-06-20       Impact factor: 4.411

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  42 in total

Review 1.  Leveraging ecological theory to guide natural product discovery.

Authors:  Michael J Smanski; Daniel C Schlatter; Linda L Kinkel
Journal:  J Ind Microbiol Biotechnol       Date:  2015-10-05       Impact factor: 3.346

Review 2.  Actinomycetes: an unexplored microorganisms for plant growth promotion and biocontrol in vegetable crops.

Authors:  A Chaurasia; B R Meena; A N Tripathi; K K Pandey; A B Rai; B Singh
Journal:  World J Microbiol Biotechnol       Date:  2018-08-13       Impact factor: 3.312

3.  Bioactive-guided fractionation of diols from Streptomyces sp. MSL.

Authors:  Raja Hima Bindhu Madasu; Vijayalakshmi Muvva; Rajesh Kumar Munaganti; Kumar Reddy Dorigondla; Venkateswarlu Yenamandra
Journal:  3 Biotech       Date:  2017-04-25       Impact factor: 2.406

4.  Saccharothrix sp. PAL54, a new chloramphenicol-producing strain isolated from a Saharan soil.

Authors:  Adel Aouiche; Nasserdine Sabaou; Atika Meklat; Abdelghani Zitouni; Christian Bijani; Florence Mathieu; Ahmed Lebrihi
Journal:  World J Microbiol Biotechnol       Date:  2011-09-22       Impact factor: 3.312

5.  RK-144171, a new benadrostin derivative produced by Streptomyces sp. RK88-1441.

Authors:  Jun-Pil Jang; Shunji Takahashi; Yushi Futamura; Toshihiko Nogawa; Jae-Hyuk Jang; Jong Seog Ahn; Hiroyuki Osada
Journal:  J Antibiot (Tokyo)       Date:  2016-06-08       Impact factor: 2.649

Review 6.  Comparative mass spectrometry-based metabolomics strategies for the investigation of microbial secondary metabolites.

Authors:  Brett C Covington; John A McLean; Brian O Bachmann
Journal:  Nat Prod Rep       Date:  2017-01-04       Impact factor: 13.423

7.  Dedicated ent-kaurene and ent-atiserene synthases for platensimycin and platencin biosynthesis.

Authors:  Michael J Smanski; Zhiguo Yu; Jeffrey Casper; Shuangjun Lin; Ryan M Peterson; Yihua Chen; Evelyn Wendt-Pienkowski; Scott R Rajski; Ben Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-08       Impact factor: 11.205

8.  Neaumycin: a new macrolide from Streptomyces sp. NEAU-x211.

Authors:  Sheng-Xiong Huang; Xiang-Jing Wang; Yijun Yan; Ji-Dong Wang; Ji Zhang; Chong-Xi Liu; Wen-Sheng Xiang; Ben Shen
Journal:  Org Lett       Date:  2012-02-14       Impact factor: 6.005

9.  Expression of the platencin biosynthetic gene cluster in heterologous hosts yielding new platencin congeners.

Authors:  Michael J Smanski; Jeffrey Casper; Ryan M Peterson; Zhiguo Yu; Scott R Rajski; Ben Shen
Journal:  J Nat Prod       Date:  2012-11-16       Impact factor: 4.050

10.  Cross-Species Induction and Enhancement of Antimicrobial Properties in Response to Gamma Irradiation in Exiguobacterium sp. HKG 126.

Authors:  Rajiv Pathak; Raj Kumar; Hemant K Gautam
Journal:  Indian J Microbiol       Date:  2013-02-12       Impact factor: 2.461

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