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Literature DB >> 20927470

Sandwich probes: two simultaneous reactions for templated nucleic acid detection.

Abstract

Fluorescence-quenched nucleic acid probes with reactive moieties at both the 5' and 3' ends are synthesized and tested for reaction with two adjacent nucleophile-containing DNAs. These probes improve signal to background over singly reactive probes and can discriminate single nucleotide polymorphisms in the target DNA or RNA.

Entities: Chemical Species

Mesh：

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Year: 2010 PMID： 20927470 PMCID： PMC5504956 DOI： 10.1039/c0cc01968b

Source DB: PubMed Journal: Chem Commun (Camb) ISSN： 1359-7345 Impact factor: 6.222

15 in total

1. Quencher as leaving group: efficient detection of DNA-joining reactions.

Authors: Shinsuke Sando; Eric T Kool
Journal: J Am Chem Soc Date: 2002-03-13 Impact factor: 15.419

2. Destabilizing universal linkers for signal amplification in self-ligating probes for RNA.

Authors: Hiroshi Abe; Eric T Kool
Journal: J Am Chem Soc Date: 2004-11-03 Impact factor: 15.419

Review 3. Detecting RNA and DNA with templated chemical reactions.

Authors: Adam P Silverman; Eric T Kool
Journal: Chem Rev Date: 2006-09 Impact factor: 60.622

4. RNA-templated chemistry in cells: discrimination of Escherichia, Shigella and Salmonella bacterial strains with a new two-color FRET strategy.

Authors: Adam P Silverman; Ellen J Baron; Eric T Kool
Journal: Chembiochem Date: 2006-12 Impact factor: 3.164

5. Diamine catalyzed hemicyanine dye formation from nonfluorescent precursors through DNA programmed chemistry.

Authors: Yumei Huang; James M Coull
Journal: J Am Chem Soc Date: 2008-02-27 Impact factor: 15.419

6. Fluorescence-based detection of single nucleotide permutation in DNA via catalytically templated reaction.

Authors: Zbigniew L Pianowski; Nicolas Winssinger
Journal: Chem Commun (Camb) Date: 2007-10-07 Impact factor: 6.222

7. Target-catalyzed transfer reactions for the amplified detection of RNA.

Authors: Tom N Grossmann; Lars Röglin; Oliver Seitz
Journal: Angew Chem Int Ed Engl Date: 2008 Impact factor: 15.336

8. Flow cytometric detection of specific RNAs in native human cells with quenched autoligating FRET probes.

Authors: Hiroshi Abe; Eric T Kool
Journal: Proc Natl Acad Sci U S A Date: 2005-12-29 Impact factor: 11.205

9. Efficient nucleic acid detection by templated reductive quencher release.

Authors: Raphael M Franzini; Eric T Kool
Journal: J Am Chem Soc Date: 2009-11-11 Impact factor: 15.419

10. Reduction-triggered fluorescent amplification probe for the detection of endogenous RNAs in living human cells.

Authors: Kazuhiro Furukawa; Hiroshi Abe; Kayo Hibino; Yasushi Sako; Satoshi Tsuneda; Yoshihiro Ito
Journal: Bioconjug Chem Date: 2009-05-20 Impact factor: 4.774

3 in total

1. Subnanomolar Detection of Oligonucleotides through Templated Fluorogenic Reaction in Hydrogels: Controlling Diffusion to Improve Sensitivity.

Authors: Dana Al Sulaiman; Jason Y H Chang; Sylvain Ladame
Journal: Angew Chem Int Ed Engl Date: 2017-04-06 Impact factor: 15.336

Review 2. Fluorescent probes for nucleic Acid visualization in fixed and live cells.

Authors: Alexandre S Boutorine; Darya S Novopashina; Olga A Krasheninina; Karine Nozeret; Alya G Venyaminova
Journal: Molecules Date: 2013-12-11 Impact factor: 4.411

3. Quantification of plasma HIV RNA using chemically engineered peptide nucleic acids.

Authors: Chao Zhao; Travis Hoppe; Mohan Kumar Haleyur Giri Setty; Danielle Murray; Tae-Wook Chun; Indira Hewlett; Daniel H Appella
Journal: Nat Commun Date: 2014-10-06 Impact factor: 14.919

3 in total