Literature DB >> 20925350

A structurally tunable DNA-based extracellular matrix.

Faisal A Aldaye1, William T Senapedis, Pamela A Silver, Jeffrey C Way.   

Abstract

The principles of DNA nanotechnology and protein engineering have been combined to generate a new class of artificial extracellular matrices. The potential of this material for ex vivo cellular scaffolding was demonstrated using experiments in which human cervical cancer cells were found to adhere strongly, stay alive, and grow with high migration rates. The use of DNA in our DNA/protein-based matrices makes these structures inherently amenable to structural tunability. By engineering single-stranded domains into the DNA portions, we were able to fine-tune the scaffold's persistence length and stiffness as perceived by cells. This was used to direct the outcome of the cell's cytoskeletal arrangement and overall shape, the status of its signal transduction protein p-FAK, and the localization of its intracellular transcription factors FOXO1a. This contribution lays the groundwork for the facile and modular construction of programmable extracellular matrices that can bring about the systematic study and replication of the naturally occurring extracellular niche.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20925350      PMCID: PMC3092387          DOI: 10.1021/ja105431h

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  20 in total

Review 1.  Hydrogels for tissue engineering.

Authors:  K Y Lee; D J Mooney
Journal:  Chem Rev       Date:  2001-07       Impact factor: 60.622

Review 2.  HeLa cells 50 years on: the good, the bad and the ugly.

Authors:  John R Masters
Journal:  Nat Rev Cancer       Date:  2002-04       Impact factor: 60.716

3.  Loading and selective release of cargo in DNA nanotubes with longitudinal variation.

Authors:  Pik Kwan Lo; Pierre Karam; Faisal A Aldaye; Christopher K McLaughlin; Graham D Hamblin; Gonzalo Cosa; Hanadi F Sleiman
Journal:  Nat Chem       Date:  2010-03-14       Impact factor: 24.427

Review 4.  Tissue cells feel and respond to the stiffness of their substrate.

Authors:  Dennis E Discher; Paul Janmey; Yu-Li Wang
Journal:  Science       Date:  2005-11-18       Impact factor: 47.728

Review 5.  Assembly and mechanosensory function of focal adhesions: experiments and models.

Authors:  Alexander D Bershadsky; Christoph Ballestrem; Letizia Carramusa; Yuliya Zilberman; Benoit Gilquin; Saadi Khochbin; Antonina Y Alexandrova; Alexander B Verkhovsky; Tom Shemesh; Michael M Kozlov
Journal:  Eur J Cell Biol       Date:  2005-12-19       Impact factor: 4.492

6.  Highly connected two-dimensional crystals of DNA six-point-stars.

Authors:  Yu He; Ye Tian; Alexander E Ribbe; Chengde Mao
Journal:  J Am Chem Soc       Date:  2006-12-20       Impact factor: 15.419

7.  Programming DNA tube circumferences.

Authors:  Peng Yin; Rizal F Hariadi; Sudheer Sahu; Harry M T Choi; Sung Ha Park; Thomas H Labean; John H Reif
Journal:  Science       Date:  2008-08-08       Impact factor: 47.728

Review 8.  Scaffolding in tissue engineering: general approaches and tissue-specific considerations.

Authors:  B P Chan; K W Leong
Journal:  Eur Spine J       Date:  2008-11-13       Impact factor: 3.134

Review 9.  The cunning little vixen: Foxo and the cycle of life and death.

Authors:  Stephen M Hedrick
Journal:  Nat Immunol       Date:  2009-08-23       Impact factor: 25.606

Review 10.  Designer DNA nanoarchitectures.

Authors:  Chenxiang Lin; Yan Liu; Hao Yan
Journal:  Biochemistry       Date:  2009-03-03       Impact factor: 3.162

View more
  12 in total

Review 1.  Natural strategies for the spatial optimization of metabolism in synthetic biology.

Authors:  Christina M Agapakis; Patrick M Boyle; Pamela A Silver
Journal:  Nat Chem Biol       Date:  2012-05-17       Impact factor: 15.040

2.  Sensitization of transforming growth factor-β signaling by multiple peptides patterned on DNA nanostructures.

Authors:  Ronnie O Pedersen; Elizabeth G Loboa; Thomas H LaBean
Journal:  Biomacromolecules       Date:  2013-11-08       Impact factor: 6.988

Review 3.  Challenges and opportunities for structural DNA nanotechnology.

Authors:  Andre V Pinheiro; Dongran Han; William M Shih; Hao Yan
Journal:  Nat Nanotechnol       Date:  2011-11-06       Impact factor: 39.213

4.  Multifunctional, biocompatible supramolecular hydrogelators consist only of nucleobase, amino acid, and glycoside.

Authors:  Xinming Li; Yi Kuang; Junfeng Shi; Yuan Gao; Hsin-Chieh Lin; Bing Xu
Journal:  J Am Chem Soc       Date:  2011-10-07       Impact factor: 15.419

5.  Chemically programmed cell adhesion with membrane-anchored oligonucleotides.

Authors:  Nicholas S Selden; Michael E Todhunter; Noel Y Jee; Jennifer S Liu; Kyle E Broaders; Zev J Gartner
Journal:  J Am Chem Soc       Date:  2011-12-28       Impact factor: 15.419

6.  Hyaluronic acid-based hydrogels with tobacco mosaic virus containing cell adhesive peptide induce bone repair in normal and osteoporotic rats.

Authors:  Jishan Yuan; Panita Maturavongsadit; Zhihui Zhou; Bin Lv; Yuan Lin; Jia Yang; Jittima Amie Luckanagul
Journal:  Biomater Transl       Date:  2020-12-28

7.  Whole genome siRNA cell-based screen links mitochondria to Akt signaling network through uncoupling of electron transport chain.

Authors:  William T Senapedis; Caleb J Kennedy; Patrick M Boyle; Pamela A Silver
Journal:  Mol Biol Cell       Date:  2011-04-01       Impact factor: 4.138

8.  Bioactive DNA-peptide nanotubes enhance the differentiation of neural stem cells into neurons.

Authors:  Nicholas Stephanopoulos; Ronit Freeman; Hilary A North; Shantanu Sur; Su Ji Jeong; Faifan Tantakitti; John A Kessler; Samuel I Stupp
Journal:  Nano Lett       Date:  2014-12-29       Impact factor: 11.189

Review 9.  Synthetic Biology: A Bridge between Artificial and Natural Cells.

Authors:  Yunfeng Ding; Fan Wu; Cheemeng Tan
Journal:  Life (Basel)       Date:  2014-12-19

10.  A new building block for DNA network formation by self-assembly and polymerase chain reaction.

Authors:  Holger Bußkamp; Sascha Keller; Marta Robotta; Malte Drescher; Andreas Marx
Journal:  Beilstein J Org Chem       Date:  2014-05-07       Impact factor: 2.883

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.