Literature DB >> 20921362

Structures of aminoacylase 3 in complex with acetylated substrates.

Jennifer M Hsieh1, Kirill Tsirulnikov, Michael R Sawaya, Nathaniel Magilnick, Natalia Abuladze, Ira Kurtz, Jeff Abramson, Alexander Pushkin.   

Abstract

Trichloroethylene (TCE) is one of the most widespread environmental contaminants, which is metabolized to N-acetyl-S-1,2-dichlorovinyl-L-cysteine (NA-DCVC) before being excreted in the urine. Alternatively, NA-DCVC can be deacetylated by aminoacylase 3 (AA3), an enzyme that is highly expressed in the kidney, liver, and brain. NA-DCVC deacetylation initiates the transformation into toxic products that ultimately causes acute renal failure. AA3 inhibition is therefore a target of interest to prevent TCE induced nephrotoxicity. Here we report the crystal structure of recombinant mouse AA3 (mAA3) in the presence of its acetate byproduct and two substrates: N(α)-acetyl-L-tyrosine and NA-DCVC. These structures, in conjunction with biochemical data, indicated that AA3 mediates substrate specificity through van der Waals interactions providing a dynamic interaction interface, which facilitates a diverse range of substrates.

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Year:  2010        PMID: 20921362      PMCID: PMC2964198          DOI: 10.1073/pnas.1006687107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Metabolism and tissue distribution of orally administered trichloroethylene in male and female rats: identification of glutathione- and cytochrome P-450-derived metabolites in liver, kidney, blood, and urine.

Authors:  Lawrence H Lash; David A Putt; Jean C Parker
Journal:  J Toxicol Environ Health A       Date:  2006-07

Review 2.  Glutathione-dependent bioactivation of haloalkenes.

Authors:  M W Anders; W Dekant
Journal:  Annu Rev Pharmacol Toxicol       Date:  1998       Impact factor: 13.820

3.  Binding of the by-product analog benzylsuccinic acid by carboxypeptidase A.

Authors:  L D Byers; R Wolfenden
Journal:  Biochemistry       Date:  1973-05-22       Impact factor: 3.162

4.  Structural characterization of dimeric murine aminoacylase III.

Authors:  Sergey Ryazantsev; Natalia Abuladze; Debra Newman; Galyna Bondar; Ira Kurtz; Alexander Pushkin
Journal:  FEBS Lett       Date:  2007-04-09       Impact factor: 4.124

5.  Acylase-catalyzed deacetylation of haloalkene-derived mercapturates.

Authors:  V Uttamsingh; M W Anders
Journal:  Chem Res Toxicol       Date:  1999-10       Impact factor: 3.739

6.  An in vitro model of renal proximal tubule cell regeneration.

Authors:  S E Kays; C D Berdanier; A R Swagler; E A Lock; R G Schnellmann
Journal:  J Pharmacol Toxicol Methods       Date:  1993-08       Impact factor: 1.950

7.  Early biological indicators of S-(1,2-dichlorovinyl)-L-cysteine nephrotoxicity in the rabbit.

Authors:  P M Silber; A J Gandolfi; K Brendel
Journal:  Drug Chem Toxicol       Date:  1986       Impact factor: 3.356

8.  Bioactivation of tetrachloroethylene. Role of glutathione S-transferase-catalyzed conjugation versus cytochrome P-450-dependent phospholipid alkylation.

Authors:  W Dekant; G Martens; S Vamvakas; M Metzler; D Henschler
Journal:  Drug Metab Dispos       Date:  1987 Sep-Oct       Impact factor: 3.922

9.  Searching protein structure databases with DaliLite v.3.

Authors:  L Holm; S Kääriäinen; P Rosenström; A Schenkel
Journal:  Bioinformatics       Date:  2008-09-25       Impact factor: 6.937

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  5 in total

1.  Inhibition of aminoacylase 3 protects rat brain cortex neuronal cells from the toxicity of 4-hydroxy-2-nonenal mercapturate and 4-hydroxy-2-nonenal.

Authors:  Kirill Tsirulnikov; Natalia Abuladze; Anatol Bragin; Kym Faull; Duilio Cascio; Robert Damoiseaux; Matthew J Schibler; Alexander Pushkin
Journal:  Toxicol Appl Pharmacol       Date:  2012-07-20       Impact factor: 4.219

2.  Carboxypeptidase O is a glycosylphosphatidylinositol-anchored intestinal peptidase with acidic amino acid specificity.

Authors:  Peter J Lyons; Lloyd D Fricker
Journal:  J Biol Chem       Date:  2011-09-15       Impact factor: 5.157

3.  Aminoacylase 3 binds to and cleaves the N-terminus of the hepatitis C virus core protein.

Authors:  Kirill Tsirulnikov; Natalia Abuladze; Ritu Vahi; Huma Hasnain; Martin Phillips; Christopher M Ryan; Ivo Atanasov; Kym F Faull; Ira Kurtz; Alexander Pushkin
Journal:  FEBS Lett       Date:  2012-09-22       Impact factor: 4.124

Review 4.  Carboxypeptidases in disease: insights from peptidomic studies.

Authors:  Matthew R Sapio; Lloyd D Fricker
Journal:  Proteomics Clin Appl       Date:  2014-03-24       Impact factor: 3.494

5.  Aminoacylase 3 Is a New Potential Marker and Therapeutic Target in Hepatocellular Carcinoma.

Authors:  Kirill Tsirulnikov; Sergio Duarte; Anamika Ray; Nakul Datta; Ali Zarrinpar; Lin Hwang; Kym Faull; Alexander Pushkin; Ira Kurtz
Journal:  J Cancer       Date:  2018-01-01       Impact factor: 4.207

  5 in total

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