Literature DB >> 20919707

A biosynthetic route to photoclick chemistry on proteins.

Jiangyun Wang1, Wei Zhang, Wenjiao Song, Yizhong Wang, Zhipeng Yu, Jiasong Li, Minhao Wu, Lin Wang, Jianye Zang, Qing Lin.   

Abstract

Light-induced chemical reactions exist in nature, regulating many important cellular and organismal functions, e.g., photosensing in prokaryotes and vision formation in mammals. Here, we report the genetic incorporation of a photoreactive unnatural amino acid, p-(2-tetrazole)phenylalanine (p-Tpa), into myoglobin site-specifically in E. coli by evolving an orthogonal tRNA/aminoacyl-tRNA synthetase pair and the use of p-Tpa as a bioorthogonal chemical "handle" for fluorescent labeling of p-Tpa-encoded myoglobin via the photoclick reaction. Moreover, we elucidated the structural basis for the biosynthetic incorporation of p-Tpa into proteins by solving the X-ray structure of p-Tpa-specific aminoacyl-tRNA synthetase in complex with p-Tpa. The genetic encoding of this photoreactive amino acid should make it possible in the future to photoregulate protein function in living systems.

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Year:  2010        PMID: 20919707      PMCID: PMC2965590          DOI: 10.1021/ja104350y

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  37 in total

1.  Movement of retinal along the visual transduction path.

Authors:  B Borhan; M L Souto; H Imai; Y Shichida; K Nakanishi
Journal:  Science       Date:  2000-06-23       Impact factor: 47.728

Review 2.  Expanding the genetic code.

Authors:  Lei Wang; Jianming Xie; Peter G Schultz
Journal:  Annu Rev Biophys Biomol Struct       Date:  2006

3.  Lithographic patterning of photoreactive cell-adhesive proteins.

Authors:  Isaac S Carrico; Stacey A Maskarinec; Sarah C Heilshorn; Marissa L Mock; Julie C Liu; Paul J Nowatzki; Christian Franck; Guruswami Ravichandran; David A Tirrell
Journal:  J Am Chem Soc       Date:  2007-03-31       Impact factor: 15.419

4.  A biosynthetic route to dehydroalanine-containing proteins.

Authors:  Jiangyun Wang; Stefan M Schiller; Peter G Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

5.  A genetically encoded diazirine photocrosslinker in Escherichia coli.

Authors:  Eric M Tippmann; Wenshe Liu; Daniel Summerer; Antha V Mack; Peter G Schultz
Journal:  Chembiochem       Date:  2007-12-17       Impact factor: 3.164

6.  Temporally precise in vivo control of intracellular signalling.

Authors:  Raag D Airan; Kimberly R Thompson; Lief E Fenno; Hannah Bernstein; Karl Deisseroth
Journal:  Nature       Date:  2009-03-18       Impact factor: 49.962

7.  Genetically encoded alkenes in yeast.

Authors:  Hui-Wang Ai; Weijun Shen; Eric Brustad; Peter G Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2010       Impact factor: 15.336

8.  A bioorthogonal chemistry strategy for probing protein lipidation in live cells.

Authors:  Wenjiao Song; Zhipeng Yu; Michael M Madden; Qing Lin
Journal:  Mol Biosyst       Date:  2010-04-30

9.  Synthesis and evaluation of photoreactive tetrazole amino acids.

Authors:  Yizhong Wang; Qing Lin
Journal:  Org Lett       Date:  2009-08-20       Impact factor: 6.005

10.  Mammalian expression of infrared fluorescent proteins engineered from a bacterial phytochrome.

Authors:  Xiaokun Shu; Antoine Royant; Michael Z Lin; Todd A Aguilera; Varda Lev-Ram; Paul A Steinbach; Roger Y Tsien
Journal:  Science       Date:  2009-05-08       Impact factor: 47.728

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  32 in total

Review 1.  Designer proteins: applications of genetic code expansion in cell biology.

Authors:  Lloyd Davis; Jason W Chin
Journal:  Nat Rev Mol Cell Biol       Date:  2012-02-15       Impact factor: 94.444

Review 2.  Photo-Triggered Click Chemistry for Biological Applications.

Authors:  András Herner; Qing Lin
Journal:  Top Curr Chem (Cham)       Date:  2015-12-11

3.  Genetically encoded tetrazine amino acid directs rapid site-specific in vivo bioorthogonal ligation with trans-cyclooctenes.

Authors:  Jason L Seitchik; Jennifer C Peeler; Michael T Taylor; Melissa L Blackman; Timothy W Rhoads; Richard B Cooley; Christian Refakis; Joseph M Fox; Ryan A Mehl
Journal:  J Am Chem Soc       Date:  2012-02-01       Impact factor: 15.419

4.  Noncanonical amino acids in the interrogation of cellular protein synthesis.

Authors:  John T Ngo; David A Tirrell
Journal:  Acc Chem Res       Date:  2011-08-04       Impact factor: 22.384

Review 5.  Photoclick chemistry: a fluorogenic light-triggered in vivo ligation reaction.

Authors:  Carlo P Ramil; Qing Lin
Journal:  Curr Opin Chem Biol       Date:  2014-07-11       Impact factor: 8.822

6.  Design and synthesis of laser-activatable tetrazoles for a fast and fluorogenic red-emitting 1,3-dipolar cycloaddition reaction.

Authors:  Peng An; Zhipeng Yu; Qing Lin
Journal:  Org Lett       Date:  2013-10-10       Impact factor: 6.005

Review 7.  Click chemistry in complex mixtures: bioorthogonal bioconjugation.

Authors:  Craig S McKay; M G Finn
Journal:  Chem Biol       Date:  2014-09-18

8.  Discovery of new photoactivatable diaryltetrazoles for photoclick chemistry via 'scaffold hopping'.

Authors:  Zhipeng Yu; Lok Yin Ho; Zhiyong Wang; Qing Lin
Journal:  Bioorg Med Chem Lett       Date:  2011-04-24       Impact factor: 2.823

9.  Genetically encoded norbornene directs site-specific cellular protein labelling via a rapid bioorthogonal reaction.

Authors:  Kathrin Lang; Lloyd Davis; Jessica Torres-Kolbus; Chungjung Chou; Alexander Deiters; Jason W Chin
Journal:  Nat Chem       Date:  2012-02-05       Impact factor: 24.427

10.  Resurrecting the Bacterial Tyrosyl-tRNA Synthetase/tRNA Pair for Expanding the Genetic Code of Both E. coli and Eukaryotes.

Authors:  James S Italia; Christopher Latour; Chester J J Wrobel; Abhishek Chatterjee
Journal:  Cell Chem Biol       Date:  2018-08-02       Impact factor: 8.116

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