Literature DB >> 20890966

Systems biology of pro-angiogenic therapies targeting the VEGF system.

Feilim Mac Gabhann1, Amina A Qutub, Brian H Annex, Aleksander S Popel.   

Abstract

Vascular endothelial growth factor (VEGF) is a family of cytokines for which the dysregulation of expression is involved in many diseases; for some, excess VEGF causes pathological hypervascularization, while for others VEGF-induced vascular remodeling may alleviate ischemia and/or hypoxia. Anti-angiogenic therapies attacking the VEGF pathway have begun to live up to their promise for treatment of certain cancers and of age-related macular degeneration. However, the corollary is not yet true: in coronary artery disease and peripheral artery disease, clinical trials of pro-angiogenic VEGF delivery have not, so far, proven successful. The VEGF and VEGF-receptor system is complex, with at least five ligand genes, some encoding multiple protein isoforms and five receptor genes. A systems biology approach for designing pro-angiogenic therapies, using a combination of quantitative experimental approaches and detailed computational models, is essential to deal with this complexity and to understand the effects of drugs targeting the system. This approach allows us to learn from unsuccessful clinical trials and to design and test novel single therapeutics or combinations of therapeutics. Among the parameters that can be varied in order to determine optimal strategy are dosage, timing of multiple doses, route of administration, and the molecular target.
© 2010 John Wiley & Sons, Inc.

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Year:  2010        PMID: 20890966      PMCID: PMC2990677          DOI: 10.1002/wsbm.92

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN: 1939-005X


  102 in total

1.  Rule-based modeling of biochemical systems with BioNetGen.

Authors:  James R Faeder; Michael L Blinov; William S Hlavacek
Journal:  Methods Mol Biol       Date:  2009

2.  Gene regulation in response to graded hypoxia: the non-redundant roles of the oxygen sensors PHD and FIH in the HIF pathway.

Authors:  Frédéric Dayan; Marc Monticelli; Jacques Pouysségur; Elisabeth Pécou
Journal:  J Theor Biol       Date:  2009-03-17       Impact factor: 2.691

Review 3.  VEGFRs and Notch: a dynamic collaboration in vascular patterning.

Authors:  Lars Jakobsson; Katie Bentley; Holger Gerhardt
Journal:  Biochem Soc Trans       Date:  2009-12       Impact factor: 5.407

4.  Computational kinetic model of VEGF trapping by soluble VEGF receptor-1: effects of transendothelial and lymphatic macromolecular transport.

Authors:  Florence T H Wu; Marianne O Stefanini; Feilim Mac Gabhann; Christopher D Kontos; Brian H Annex; Aleksander S Popel
Journal:  Physiol Genomics       Date:  2009-04-07       Impact factor: 3.107

5.  VEGF gene therapy fails to improve perfusion of ischemic myocardium in patients with advanced coronary disease: results of the NORTHERN trial.

Authors:  Duncan J Stewart; Michael J B Kutryk; David Fitchett; Michael Freeman; Nancy Camack; Yinghua Su; Anthony Della Siega; Luc Bilodeau; Jeffrey R Burton; Guy Proulx; Sam Radhakrishnan
Journal:  Mol Ther       Date:  2009-04-07       Impact factor: 11.454

Review 6.  Human studies of angiogenic gene therapy.

Authors:  Rajesh Gupta; Jörn Tongers; Douglas W Losordo
Journal:  Circ Res       Date:  2009-10-09       Impact factor: 17.367

7.  Promoting angiogenesis via manipulation of VEGF responsiveness with notch signaling.

Authors:  Lan Cao; Praveen R Arany; Yuan-Shuo Wang; David J Mooney
Journal:  Biomaterials       Date:  2009-05-29       Impact factor: 12.479

8.  Inhibition of prolyl hydroxylase domain proteins promotes therapeutic revascularization.

Authors:  Céline Loinard; Amandine Ginouvès; José Vilar; Clément Cochain; Yasmine Zouggari; Alice Recalde; Micheline Duriez; Bernard I Lévy; Jacques Pouysségur; Edurne Berra; Jean-Sébastien Silvestre
Journal:  Circulation       Date:  2009-06-22       Impact factor: 29.690

Review 9.  Vascular endothelial growth factors: biology and current status of clinical applications in cardiovascular medicine.

Authors:  Seppo Ylä-Herttuala; Tuomas T Rissanen; Ismo Vajanto; Juha Hartikainen
Journal:  J Am Coll Cardiol       Date:  2007-02-23       Impact factor: 24.094

10.  Tipping the balance: robustness of tip cell selection, migration and fusion in angiogenesis.

Authors:  Katie Bentley; Giovanni Mariggi; Holger Gerhardt; Paul A Bates
Journal:  PLoS Comput Biol       Date:  2009-10-30       Impact factor: 4.475

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  40 in total

Review 1.  Theoretical models for coronary vascular biomechanics: progress & challenges.

Authors:  Sarah L Waters; Jordi Alastruey; Daniel A Beard; Peter H M Bovendeerd; Peter F Davies; Girija Jayaraman; Oliver E Jensen; Jack Lee; Kim H Parker; Aleksander S Popel; Timothy W Secomb; Maria Siebes; Spencer J Sherwin; Rebecca J Shipley; Nicolas P Smith; Frans N van de Vosse
Journal:  Prog Biophys Mol Biol       Date:  2010-10-30       Impact factor: 3.667

2.  Computational model of VEGFR2 pathway to ERK activation and modulation through receptor trafficking.

Authors:  Wan Hua Tan; Aleksander S Popel; Feilim Mac Gabhann
Journal:  Cell Signal       Date:  2013-08-29       Impact factor: 4.315

Review 3.  Integration of systems glycobiology with bioinformatics toolboxes, glycoinformatics resources, and glycoproteomics data.

Authors:  Gang Liu; Sriram Neelamegham
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2015-04-13

4.  Quantification and cell-to-cell variation of vascular endothelial growth factor receptors.

Authors:  P I Imoukhuede; Aleksander S Popel
Journal:  Exp Cell Res       Date:  2010-12-23       Impact factor: 3.905

Review 5.  Systems biology of the microvasculature.

Authors:  Lindsay E Clegg; Feilim Mac Gabhann
Journal:  Integr Biol (Camb)       Date:  2015-04-02       Impact factor: 2.192

Review 6.  Crosstalk between cancer cells and blood endothelial and lymphatic endothelial cells in tumour and organ microenvironment.

Authors:  Esak Lee; Niranjan B Pandey; Aleksander S Popel
Journal:  Expert Rev Mol Med       Date:  2015-01-30       Impact factor: 5.600

7.  Direct measurements of VEGF-VEGFR2 binding affinities reveal the coupling between ligand binding and receptor dimerization.

Authors:  Christopher King; Kalina Hristova
Journal:  J Biol Chem       Date:  2019-04-25       Impact factor: 5.157

8.  Fully quantified spectral imaging reveals in vivo membrane protein interactions.

Authors:  Christopher King; Michael Stoneman; Valerica Raicu; Kalina Hristova
Journal:  Integr Biol (Camb)       Date:  2016-01-20       Impact factor: 2.192

Review 9.  Therapeutic angiogenesis for critical limb ischaemia.

Authors:  Brian H Annex
Journal:  Nat Rev Cardiol       Date:  2013-05-14       Impact factor: 32.419

10.  PADPIN: protein-protein interaction networks of angiogenesis, arteriogenesis, and inflammation in peripheral arterial disease.

Authors:  Liang-Hui Chu; Chaitanya G Vijay; Brian H Annex; Joel S Bader; Aleksander S Popel
Journal:  Physiol Genomics       Date:  2015-06-09       Impact factor: 3.107

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