Literature DB >> 20886905

Myristate exposure in the human immunodeficiency virus type 1 matrix protein is modulated by pH.

Emily L Fledderman1, Ken Fujii, Ruba H Ghanam, Kayoko Waki, Peter E Prevelige, Eric O Freed, Jamil S Saad.   

Abstract

Human immunodeficiency virus type 1 (HIV-1) encodes a polypeptide called Gag that is capable of forming virus-like particles (VLPs) in vitro in the absence of other cellular or viral constituents. During the late phase of HIV-1 infection, Gag polyproteins are transported to the plasma membrane (PM) for assembly. A combination of in vivo, in vitro, and structural studies have shown that Gag targeting and assembly on the PM are mediated by specific interactions between the myristoylated matrix [myr(+)MA] domain of Gag and phosphatidylinositol 4,5-bisphosphate [PI(4,5)P2]. Exposure of the MA myristyl (myr) group is triggered by PI(4,5)P2 binding and is enhanced by factors that promote protein self-association. In the studies reported here, we demonstrate that myr exposure in MA is modulated by pH. Our data show that deprotonation of the His89 imidazole ring in myr(+)MA destabilizes the salt bridge formed between His89(Hδ2) and Glu12(COO-), leading to tight sequestration of the myr group and a shift in the equilibrium from trimer to monomer. Furthermore, we show that oligomerization of a Gag-like construct containing matrix-capsid is also pH-dependent. Disruption of the HisGlu salt bridge by single-amino acid substitutions greatly altered the myr-sequestered−myr-exposed equilibrium. In vivo intracellular localization data revealed that the H89G mutation retargets Gag to intracellular compartments and severely inhibits virus production. Our findings reveal that the MA domain acts as a “pH sensor” in vitro, suggesting that the effect of pH on HIV-1 Gag targeting and binding to the PM warrants investigation.

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Year:  2010        PMID: 20886905      PMCID: PMC3032006          DOI: 10.1021/bi101245j

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  89 in total

1.  Salt bridge stability in monomeric proteins.

Authors:  S Kumar; R Nussinov
Journal:  J Mol Biol       Date:  1999-11-12       Impact factor: 5.469

2.  Image reconstructions of helical assemblies of the HIV-1 CA protein.

Authors:  S Li; C P Hill; W I Sundquist; J T Finch
Journal:  Nature       Date:  2000-09-21       Impact factor: 49.962

3.  Entropic switch regulates myristate exposure in the HIV-1 matrix protein.

Authors:  Chun Tang; Erin Loeliger; Paz Luncsford; Isaac Kinde; Dorothy Beckett; Michael F Summers
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-29       Impact factor: 11.205

4.  Ion-pairs in proteins.

Authors:  D J Barlow; J M Thornton
Journal:  J Mol Biol       Date:  1983-08-25       Impact factor: 5.469

5.  Evidence that productive human immunodeficiency virus type 1 assembly can occur in an intracellular compartment.

Authors:  Anjali Joshi; Sherimay D Ablan; Ferri Soheilian; Kunio Nagashima; Eric O Freed
Journal:  J Virol       Date:  2009-03-18       Impact factor: 5.103

6.  Analysis of human immunodeficiency virus type 1 matrix binding to membranes and nucleic acids.

Authors:  Ayna Alfadhli; Amelia Still; Eric Barklis
Journal:  J Virol       Date:  2009-09-23       Impact factor: 5.103

7.  Opposing mechanisms involving RNA and lipids regulate HIV-1 Gag membrane binding through the highly basic region of the matrix domain.

Authors:  Vineela Chukkapalli; Seung J Oh; Akira Ono
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-04       Impact factor: 11.205

8.  Relationship between ion pair geometries and electrostatic strengths in proteins.

Authors:  Sandeep Kumar; Ruth Nussinov
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

9.  In vitro assembly properties of human immunodeficiency virus type 1 Gag protein lacking the p6 domain.

Authors:  S Campbell; A Rein
Journal:  J Virol       Date:  1999-03       Impact factor: 5.103

10.  Structure of full-length HIV-1 CA: a model for the mature capsid lattice.

Authors:  Barbie K Ganser-Pornillos; Anchi Cheng; Mark Yeager
Journal:  Cell       Date:  2007-10-05       Impact factor: 41.582

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  30 in total

1.  Binding of calmodulin to the HIV-1 matrix protein triggers myristate exposure.

Authors:  Ruba H Ghanam; Timothy F Fernandez; Emily L Fledderman; Jamil S Saad
Journal:  J Biol Chem       Date:  2010-10-18       Impact factor: 5.157

2.  NMR, biophysical, and biochemical studies reveal the minimal Calmodulin binding domain of the HIV-1 matrix protein.

Authors:  Alexandra B Samal; Ruba H Ghanam; Timothy F Fernandez; Eric B Monroe; Jamil S Saad
Journal:  J Biol Chem       Date:  2011-07-28       Impact factor: 5.157

3.  Solution structure of calmodulin bound to the binding domain of the HIV-1 matrix protein.

Authors:  Jiri Vlach; Alexandra B Samal; Jamil S Saad
Journal:  J Biol Chem       Date:  2014-02-05       Impact factor: 5.157

4.  Coarse-grained simulations of the HIV-1 matrix protein anchoring: revisiting its assembly on membrane domains.

Authors:  Landry Charlier; Maxime Louet; Laurent Chaloin; Patrick Fuchs; Jean Martinez; Delphine Muriaux; Cyril Favard; Nicolas Floquet
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

5.  Immature HIV-1 lattice assembly dynamics are regulated by scaffolding from nucleic acid and the plasma membrane.

Authors:  Alexander J Pak; John M A Grime; Prabuddha Sengupta; Antony K Chen; Aleksander E P Durumeric; Anand Srivastava; Mark Yeager; John A G Briggs; Jennifer Lippincott-Schwartz; Gregory A Voth
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-07       Impact factor: 11.205

6.  Structural and biophysical characterizations of HIV-1 matrix trimer binding to lipid nanodiscs shed light on virus assembly.

Authors:  R Elliot Murphy; Alexandra B Samal; Jiri Vlach; Vicente Mas; Peter E Prevelige; Jamil S Saad
Journal:  J Biol Chem       Date:  2019-10-22       Impact factor: 5.157

Review 7.  Molecular determinants that regulate plasma membrane association of HIV-1 Gag.

Authors:  Vineela Chukkapalli; Akira Ono
Journal:  J Mol Biol       Date:  2011-07-22       Impact factor: 5.469

Review 8.  Considering protonation as a posttranslational modification regulating protein structure and function.

Authors:  André Schönichen; Bradley A Webb; Matthew P Jacobson; Diane L Barber
Journal:  Annu Rev Biophys       Date:  2013-02-28       Impact factor: 12.981

Review 9.  Roles played by acidic lipids in HIV-1 Gag membrane binding.

Authors:  Balaji Olety; Akira Ono
Journal:  Virus Res       Date:  2014-07-03       Impact factor: 3.303

10.  Structural and Molecular Determinants of Membrane Binding by the HIV-1 Matrix Protein.

Authors:  Peter Y Mercredi; Nadine Bucca; Burk Loeliger; Christy R Gaines; Mansi Mehta; Pallavi Bhargava; Philip R Tedbury; Landry Charlier; Nicolas Floquet; Delphine Muriaux; Cyril Favard; Charles R Sanders; Eric O Freed; Jan Marchant; Michael F Summers
Journal:  J Mol Biol       Date:  2016-03-16       Impact factor: 5.469

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