Literature DB >> 20866853

Specific adhesion of membranes: Mapping to an effective bond lattice gas.

Thomas Speck1, Ellen Reister, Udo Seifert.   

Abstract

We theoretically consider specific adhesion of a fluctuating membrane to a hard substrate via the formation of bonds between receptors attached to the substrate and ligands in the membrane. By integrating out the degrees of freedom of the membrane shape, we show that in the biologically relevant limit specific adhesion is well described by a lattice gas model, where lattice sites correspond to bond sites. We derive an explicit expression for the effective bond interactions induced by the thermal undulations of the membrane. Furthermore, we compare kinetic Monte Carlo simulations for our lattice gas model with full dynamic simulations that take into account both the shape fluctuations of the membrane and reactions between receptors and ligands at bond sites. We demonstrate that an appropriate mapping of the height dependent binding and unbinding rates in the full scheme to rates in the lattice gas model leads to good agreement.

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Year:  2010        PMID: 20866853     DOI: 10.1103/PhysRevE.82.021923

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  8 in total

1.  Statistical Mechanics of an Elastically Pinned Membrane: Static Profile and Correlations.

Authors:  Josip Augustin Janeš; Henning Stumpf; Daniel Schmidt; Udo Seifert; Ana-Sunčana Smith
Journal:  Biophys J       Date:  2018-12-08       Impact factor: 4.033

Review 2.  Binding equilibrium and kinetics of membrane-anchored receptors and ligands in cell adhesion: Insights from computational model systems and theory.

Authors:  Thomas R Weikl; Jinglei Hu; Guang-Kui Xu; Reinhard Lipowsky
Journal:  Cell Adh Migr       Date:  2016-06-13       Impact factor: 3.405

3.  Lattice Models for Protein Organization throughout Thylakoid Membrane Stacks.

Authors:  Andreana M Rosnik; Phillip L Geissler
Journal:  Biophys J       Date:  2020-05-01       Impact factor: 4.033

4.  Seeing the Forest in Lieu of the Trees: Continuum Simulations of Cell Membranes at Large Length Scales.

Authors:  Kayla Sapp; Roie Shlomovitz; Lutz Maibaum
Journal:  Annu Rep Comput Chem       Date:  2014-12-04

5.  Suppressing membrane height fluctuations leads to a membrane-mediated interaction among proteins.

Authors:  Kayla Sapp; Lutz Maibaum
Journal:  Phys Rev E       Date:  2016-11-29       Impact factor: 2.529

6.  Interplay Between Receptor-Ligand Binding and Lipid Domain Formation Depends on the Mobility of Ligands in Cell-Substrate Adhesion.

Authors:  Long Li; Xiaohuan Wang; Helong Wu; Yingfeng Shao; Huaping Wu; Fan Song
Journal:  Front Mol Biosci       Date:  2021-04-12

7.  The Effect of Thermal Fluctuation on the Receptor-Mediated Adhesion of a Cell Membrane to an Elastic Substrate.

Authors:  Bahador Marzban; Hongyan Yuan
Journal:  Membranes (Basel)       Date:  2017-04-27

8.  A lipid bound actin meshwork organizes liquid phase separation in model membranes.

Authors:  Alf Honigmann; Sina Sadeghi; Jan Keller; Stefan W Hell; Christian Eggeling; Richard Vink
Journal:  Elife       Date:  2014-03-18       Impact factor: 8.140

  8 in total

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