Literature DB >> 20838977

Beyond rhodopsin: G protein-coupled receptor structure and modeling incorporating the beta2-adrenergic and adenosine A(2A) crystal structures.

Andrew J Tebben1, Dora M Schnur.   

Abstract

For quite some time, the majority of GPCR models have been based on a single template structure: dark-adapted bovine rhodopsin. The recent solution of β2AR, β1AR and adenosine A(2A) receptor crystal structures has dramatically expanded the GPCR structural landscape and provided many new insights into receptor conformation and ligand binding. They will serve as templates for the next generation of GPCR models, but also allow direct validation of previous models and computational techniques. This review summarizes key findings from the new structures, comparison of existing models to these structures and highlights new models constructed from these templates.

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Year:  2011        PMID: 20838977     DOI: 10.1007/978-1-60761-839-3_15

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

1.  Helix 8 plays a crucial role in bradykinin B(2) receptor trafficking and signaling.

Authors:  Jens Feierler; Markus Wirth; Benjamin Welte; Steffen Schüssler; Marianne Jochum; Alexander Faussner
Journal:  J Biol Chem       Date:  2011-10-20       Impact factor: 5.157

Review 2.  Frizzled and LRP5/6 receptors for Wnt/β-catenin signaling.

Authors:  Bryan T MacDonald; Xi He
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-12-01       Impact factor: 10.005

3.  Hydrophobicity profiles in G protein-coupled receptor transmembrane helical domains.

Authors:  Chiquito J Crasto
Journal:  J Receptor Ligand Channel Res       Date:  2010

4.  Identification of a novel selective serotonin reuptake inhibitor by coupling monoamine transporter-based virtual screening and rational molecular hybridization.

Authors:  Tammy L Nolan; David J Lapinsky; Jeffery N Talbot; Martín Indarte; Yi Liu; Sankar Manepalli; Laura M Geffert; Mary Ellen Amos; Phillip N Taylor; Jeffry D Madura; Christopher K Surratt
Journal:  ACS Chem Neurosci       Date:  2011-06-08       Impact factor: 4.418

5.  A hybrid structural approach to analyze ligand binding by the serotonin type 4 receptor (5-HT4).

Authors:  Pius S Padayatti; Liwen Wang; Sayan Gupta; Tivadar Orban; Wenyu Sun; David Salom; Steven R Jordan; Krzysztof Palczewski; Mark R Chance
Journal:  Mol Cell Proteomics       Date:  2013-02-01       Impact factor: 5.911

6.  Uncoupling stimulus specificity and glomerular position in the mouse olfactory system.

Authors:  Jingji Zhang; Guangzhe Huang; Adam Dewan; Paul Feinstein; Thomas Bozza
Journal:  Mol Cell Neurosci       Date:  2012-08-21       Impact factor: 4.314

Review 7.  Current progress in Structure-Based Rational Drug Design marks a new mindset in drug discovery.

Authors:  Valère Lounnas; Tina Ritschel; Jan Kelder; Ross McGuire; Robert P Bywater; Nicolas Foloppe
Journal:  Comput Struct Biotechnol J       Date:  2013-04-02       Impact factor: 7.271

8.  Beyond modeling: all-atom olfactory receptor model simulations.

Authors:  Peter C Lai; Chiquito J Crasto
Journal:  Front Genet       Date:  2012-05-03       Impact factor: 4.599

9.  A horizontal alignment tool for numerical trend discovery in sequence data: application to protein hydropathy.

Authors:  Omar Hadzipasic; James O Wrabl; Vincent J Hilser
Journal:  PLoS Comput Biol       Date:  2013-10-10       Impact factor: 4.475

  9 in total

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