Literature DB >> 20823519

Crystallization and calcium/sulfur SAD phasing of the human EF-hand protein S100A2.

Michael Koch1, Joachim Diez, Armin Wagner, Günter Fritz.   

Abstract

Human S100A2 is an EF-hand protein and acts as a major tumour suppressor, binding and activating p53 in a Ca2+-dependent manner. Ca2+-bound S100A2 was crystallized and its structure was determined based on the anomalous scattering provided by six S atoms from methionine residues and four calcium ions present in the asymmetric unit. Although the diffraction data were recorded at a wavelength of 0.90 A, which is usually not assumed to be suitable for calcium/sulfur SAD, the anomalous signal was satisfactory. A nine-atom substructure was determined at 1.8 A resolution using SHELXD, and SHELXE was used for density modification and phase extension to 1.3 A resolution. The electron-density map obtained was well interpretable and could be used for automated model building by ARP/wARP.

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Year:  2010        PMID: 20823519      PMCID: PMC2935220          DOI: 10.1107/S1744309110030691

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  24 in total

1.  Efficient anisotropic refinement of macromolecular structures using FFT.

Authors:  G N Murshudov; A A Vagin; A Lebedev; K S Wilson; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-01-01

2.  Improved methods for building protein models in electron density maps and the location of errors in these models.

Authors:  T A Jones; J Y Zou; S W Cowan; M Kjeldgaard
Journal:  Acta Crystallogr A       Date:  1991-03-01       Impact factor: 2.290

3.  Proteins of the S100 family regulate the oligomerization of p53 tumor suppressor.

Authors:  Maria Rosario Fernandez-Fernandez; Dmitry B Veprintsev; Alan R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-21       Impact factor: 11.205

4.  An update of the S100 nomenclature.

Authors:  Ingo Marenholz; Ruth C Lovering; Claus W Heizmann
Journal:  Biochim Biophys Acta       Date:  2006-07-26

5.  The crystal structure of the human (S100A8/S100A9)2 heterotetramer, calprotectin, illustrates how conformational changes of interacting alpha-helices can determine specific association of two EF-hand proteins.

Authors:  Ingo P Korndörfer; Florian Brueckner; Arne Skerra
Journal:  J Mol Biol       Date:  2007-05-03       Impact factor: 5.469

Review 6.  S100 proteins in mouse and man: from evolution to function and pathology (including an update of the nomenclature).

Authors:  Ingo Marenholz; Claus W Heizmann; Günter Fritz
Journal:  Biochem Biophys Res Commun       Date:  2004-10-01       Impact factor: 3.575

7.  Positive selection of candidate tumor-suppressor genes by subtractive hybridization.

Authors:  S W Lee; C Tomasetto; R Sager
Journal:  Proc Natl Acad Sci U S A       Date:  1991-04-01       Impact factor: 11.205

8.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

9.  Crystal structure of Ca2+ -free S100A2 at 1.6-A resolution.

Authors:  Michael Koch; Joachim Diez; Günter Fritz
Journal:  J Mol Biol       Date:  2008-03-19       Impact factor: 5.469

10.  Distinct subcellular localization of calcium binding S100 proteins in human smooth muscle cells and their relocation in response to rises in intracellular calcium.

Authors:  A Mandinova; D Atar; B W Schäfer; M Spiess; U Aebi; C W Heizmann
Journal:  J Cell Sci       Date:  1998-07-30       Impact factor: 5.285

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  1 in total

Review 1.  Influence of S100A2 in Human Diseases.

Authors:  Hitomi Sugino; Yu Sawada
Journal:  Diagnostics (Basel)       Date:  2022-07-20
  1 in total

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