Literature DB >> 20823217

Comparison of unrestrained plethysmography and forced oscillation for identifying genetic variability of airway responsiveness in inbred mice.

Annerose Berndt1, Adriana S Leme, Laura K Williams, Randy Von Smith, Holly S Savage, Timothy M Stearns, Shirng-Wern Tsaih, Steven D Shapiro, Luanne L Peters, Beverly Paigen, Karen L Svenson.   

Abstract

Lung function detection in mice is currently most accurately measured by invasive techniques, which are costly, labor intensive, and terminal. This limits their use for large-scale or longitudinal studies. Noninvasive assays are often used instead, but their accuracy for measuring lung function parameters such as resistance and elastance has been questioned in studies involving small numbers of mouse strains. Here we compared parameters detected by two different methods using 29 inbred mouse strains: enhanced pause (Penh), detected by unrestrained plethysmography, and central airway resistance and lung elastance, detected by a forced oscillation technique. We further tested whether the phenotypic variations were determined by the same genomic location in genome-wide association studies using a linear mixed model algorithm. Penh, resistance, and elastance were measured in nonexposed mice or mice exposed to saline and increasing doses of aerosolized methacholine. Because Penh differed from airway resistance in several strains and because the peak genetic associations found for Penh, resistance, or elastance were located at different genomic regions, we conclude that using Penh as an indicator for lung function changes in high-throughput genetic studies (i.e., genome-wide association studies or quantitative trait locus studies) measures something fundamentally different than airway resistance and lung elastance.

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Year:  2010        PMID: 20823217      PMCID: PMC3026348          DOI: 10.1152/physiolgenomics.00108.2010

Source DB:  PubMed          Journal:  Physiol Genomics        ISSN: 1094-8341            Impact factor:   3.107


  30 in total

1.  Quantitative trait locus mapping of airway responsiveness to chromosomes 6 and 7 in inbred mice.

Authors:  G T De Sanctis; J B Singer; A Jiao; C N Yandava; Y H Lee; T C Haynes; E S Lander; D R Beier; J M Drazen
Journal:  Am J Physiol       Date:  1999-12

Review 2.  Further exploration of the Penh parameter.

Authors:  Morton Lomask
Journal:  Exp Toxicol Pathol       Date:  2006-04-25

3.  Why can't mice just learn to pant?

Authors:  Wayne Mitzner
Journal:  J Appl Physiol (1985)       Date:  2008-06-05

4.  Efficient control of population structure in model organism association mapping.

Authors:  Hyun Min Kang; Noah A Zaitlen; Claire M Wade; Andrew Kirby; David Heckerman; Mark J Daly; Eleazar Eskin
Journal:  Genetics       Date:  2008-03       Impact factor: 4.562

5.  Noninvasive system for evaluating the allergen-specific airway response in a murine model of asthma.

Authors:  M Dohi; S Tsukamoto; T Nagahori; K Shinagawa; K Saitoh; Y Tanaka; S Kobayashi; R Tanaka; Y To; K Yamamoto
Journal:  Lab Invest       Date:  1999-12       Impact factor: 5.662

6.  A survey of airway responsiveness in 36 inbred mouse strains facilitates gene mapping studies and identification of quantitative trait loci.

Authors:  Adriana S Leme; Annerose Berndt; Laura K Williams; Shirng-Wern Tsaih; Jin P Szatkiewicz; Ricardo Verdugo; Beverly Paigen; Steven D Shapiro
Journal:  Mol Genet Genomics       Date:  2010-02-09       Impact factor: 3.291

7.  A customized and versatile high-density genotyping array for the mouse.

Authors:  Hyuna Yang; Yueming Ding; Lucie N Hutchins; Jin Szatkiewicz; Timothy A Bell; Beverly J Paigen; Joel H Graber; Fernando Pardo-Manuel de Villena; Gary A Churchill
Journal:  Nat Methods       Date:  2009-08-09       Impact factor: 28.547

Review 8.  Sex differences in mouse models of asthma.

Authors:  Herng-Yu Sucie Chang; Wayne Mitzner
Journal:  Can J Physiol Pharmacol       Date:  2007-12       Impact factor: 2.273

9.  An improved simple method of mouse lung intubation.

Authors:  Kelvin D MacDonald; Herng-Yu Sucie Chang; Wayne Mitzner
Journal:  J Appl Physiol (1985)       Date:  2009-01-15

10.  Mouse genome-wide association mapping needs linkage analysis to avoid false-positive Loci.

Authors:  Giacomo Manenti; Antonella Galvan; Angela Pettinicchio; Gaia Trincucci; Elena Spada; Anna Zolin; Silvano Milani; Anna Gonzalez-Neira; Tommaso A Dragani
Journal:  PLoS Genet       Date:  2009-01-09       Impact factor: 5.917

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  18 in total

1.  Useful models of asthma need to properly phenotype airway narrowing.

Authors:  Zoltan Hantos; Lennart Lundblad; Jason Bates; Charles Irvin; Peter Sly; Wayne Mitzner
Journal:  Am J Respir Cell Mol Biol       Date:  2011-12       Impact factor: 6.914

2.  Measuring respiratory function in mice using unrestrained whole-body plethysmography.

Authors:  Rebecca Lim; Marcus J Zavou; Phillipa-Louise Milton; Siow Teng Chan; Jean L Tan; Hayley Dickinson; Sean V Murphy; Graham Jenkin; Euan M Wallace
Journal:  J Vis Exp       Date:  2014-08-12       Impact factor: 1.355

3.  Phenotypic characterization of the KK/HlJ inbred mouse strain.

Authors:  A Berndt; B A Sundberg; K A Silva; V E Kennedy; M A Richardson; Q Li; R T Bronson; J Uitto; J P Sundberg
Journal:  Vet Pathol       Date:  2013-09-05       Impact factor: 2.221

4.  Development of Inhaled GABAA Receptor Modulators to Improve Airway Function in Bronchoconstrictive Disorders.

Authors:  Nicolas M Zahn; M S Rashid Roni; Gene T Yocum; Michelle J Meyer; Daniel A Webb; Md Yeunus Mian; James M Cook; Douglas C Stafford; Charles W Emala; Leggy A Arnold
Journal:  ACS Pharmacol Transl Sci       Date:  2022-02-01

5.  High-throughput visual assessment of sleep stages in mice using machine learning.

Authors:  Brian Geuther; Mandy Chen; Raymond J Galante; Owen Han; Jie Lian; Joshy George; Allan I Pack; Vivek Kumar
Journal:  Sleep       Date:  2022-02-14       Impact factor: 5.849

6.  Recurring BALB/c mouse lung inflammatory responses to episodic allergen exposure.

Authors:  S J Wilson; M J Harmer; R L Lee; H M Rigden; N M Doyon-Reale; K M Forman; X Gao; M W Lieh-Lai; D J P Bassett
Journal:  J Toxicol Environ Health A       Date:  2013

7.  Mouse genome-wide association study identifies polymorphisms on chromosomes 4, 11, and 15 for age-related cardiac fibrosis.

Authors:  Qiaoli Li; Annerose Berndt; Beth A Sundberg; Kathleen A Silva; Victoria E Kennedy; Clinton L Cario; Matthew A Richardson; Thomas H Chase; Paul N Schofield; Jouni Uitto; John P Sundberg
Journal:  Mamm Genome       Date:  2016-04-28       Impact factor: 2.957

8.  Approaches to Investigating Complex Genetic Traits in a Large-Scale Inbred Mouse Aging Study.

Authors:  J P Sundberg; A Berndt; B A Sundberg; K A Silva; V Kennedy; R S Smith; T K Cooper; P N Schofield
Journal:  Vet Pathol       Date:  2016-03       Impact factor: 2.221

9.  Neuroimmune semaphorin 4D is necessary for optimal lung allergic inflammation.

Authors:  K Shanks; E H Nkyimbeng-Takwi; E Smith; M M Lipsky; L J DeTolla; D W Scott; A D Keegan; S P Chapoval
Journal:  Mol Immunol       Date:  2013-08-01       Impact factor: 4.407

Review 10.  Drug class effects on respiratory mechanics in animal models: access and applications.

Authors:  Maria A Oliveira; Alembert E Lino-Alvarado; Henrique T Moriya; Renato L Vitorasso
Journal:  Exp Biol Med (Maywood)       Date:  2021-02-18
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