Literature DB >> 20822129

Physiological and transcriptional studies of Cr(VI) reduction under aerobic and denitrifying conditions by an aquifer-derived pseudomonad.

Ruyang Han1, Jil T Geller, Li Yang, Eoin L Brodie, Romy Chakraborty, Joern T Larsen, Harry R Beller.   

Abstract

Cr(VI) is a widespread groundwater contaminant that is a potent toxin, mutagen, and carcinogen. In situ reductive immobilization is a favored approach for Cr(VI) bioremediation, and Cr(VI) reduction has been reported in a variety of aerobic, facultative, and anaerobic bacteria, including a number of pseudomonads. However, studies comparing Cr(VI) reduction under aerobic and denitrifying conditions in the same organism are not available. We have conducted studies with strain RCH2, a bacterium similar to Pseudomonas stutzeri that we isolated from a Cr-contaminated aquifer. Cell suspension studies with lactate demonstrated that Cr(VI) reduction could occur under either denitrifying or aerobic conditions (at comparable specific rates) and that reduction was at least 20-fold more rapid when the terminal electron acceptor (i.e., nitrate or O(2)) was present. Our results suggest that Cr(VI) reduction by strain RCH2 under either aerobic or denitrifying conditions is primarily cometabolic in the sense that the physiological electron acceptor (oxygen or nitrate) appears to be required. Under both aerobic and denitrifying conditions, the gene(s) associated with chromate reduction are not inducible by Cr. Continuous culture (chemostat) studies showed strong correlations (r(2) values >0.93) between nitrate reduction rate and the transcript copy number of either nirS (cytochrome cd(1) nitrite reductase) or narG (nitrate reductase α subunit). As our studies indicate that anaerobic Cr(VI) reduction by this pseudomonad requires active denitrification and that denitrification and chromate reduction rates are highly correlated (r(2) > 0.99), monitoring expression of such denitrification genes in biostimulated aquifers could provide valuable proxy information for in situ chromate reduction by similar bacteria even if the specific genes involved in chromate reduction have not been identified. We also report incomplete removal of reduced Cr from solution and on artifacts in the widely used diphenylcarbazide assay for Cr(VI), most notably, its complete inactivation in the presence of millimolar nitrite.

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Year:  2010        PMID: 20822129     DOI: 10.1021/es101152r

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  16 in total

1.  Differential isotopic fractionation during Cr(VI) reduction by an aquifer-derived bacterium under aerobic versus denitrifying conditions.

Authors:  Ruyang Han; Liping Qin; Shaun T Brown; John N Christensen; Harry R Beller
Journal:  Appl Environ Microbiol       Date:  2012-01-27       Impact factor: 4.792

2.  Microfluidic fluorescence in situ hybridization and flow cytometry (μFlowFISH).

Authors:  Peng Liu; Robert J Meagher; Yooli K Light; Suzan Yilmaz; Romy Chakraborty; Adam P Arkin; Terry C Hazen; Anup K Singh
Journal:  Lab Chip       Date:  2011-07-14       Impact factor: 6.799

3.  PCR amplification-independent methods for detection of microbial communities by the high-density microarray PhyloChip.

Authors:  Kristen M DeAngelis; Cindy H Wu; Harry R Beller; Eoin L Brodie; Romy Chakraborty; Todd Z DeSantis; Julian L Fortney; Terry C Hazen; Shariff R Osman; Mary E Singer; Lauren M Tom; Gary L Andersen
Journal:  Appl Environ Microbiol       Date:  2011-07-15       Impact factor: 4.792

4.  Molybdenum Availability Is Key to Nitrate Removal in Contaminated Groundwater Environments.

Authors:  Michael P Thorgersen; W Andrew Lancaster; Brian J Vaccaro; Farris L Poole; Andrea M Rocha; Tonia Mehlhorn; Angelica Pettenato; Jayashree Ray; R Jordan Waters; Ryan A Melnyk; Romy Chakraborty; Terry C Hazen; Adam M Deutschbauer; Adam P Arkin; Michael W W Adams
Journal:  Appl Environ Microbiol       Date:  2015-05-15       Impact factor: 4.792

5.  Novel Metal Cation Resistance Systems from Mutant Fitness Analysis of Denitrifying Pseudomonas stutzeri.

Authors:  Brian J Vaccaro; W Andrew Lancaster; Michael P Thorgersen; Grant M Zane; Adam D Younkin; Alexey E Kazakov; Kelly M Wetmore; Adam Deutschbauer; Adam P Arkin; Pavel S Novichkov; Judy D Wall; Michael W W Adams
Journal:  Appl Environ Microbiol       Date:  2016-09-16       Impact factor: 4.792

6.  Environmental status of groundwater affected by chromite ore processing residue (COPR) dumpsites during pre-monsoon and monsoon seasons.

Authors:  Katrin Matern; Harald Weigand; Abhas Singh; Tim Mansfeldt
Journal:  Environ Sci Pollut Res Int       Date:  2016-11-23       Impact factor: 4.223

7.  Genomic and physiological characterization of the chromate-reducing, aquifer-derived Firmicute Pelosinus sp. strain HCF1.

Authors:  Harry R Beller; Ruyang Han; Ulas Karaoz; Hsiaochien Lim; Eoin L Brodie
Journal:  Appl Environ Microbiol       Date:  2012-10-12       Impact factor: 4.792

8.  Determining Roles of Accessory Genes in Denitrification by Mutant Fitness Analyses.

Authors:  Brian J Vaccaro; Michael P Thorgersen; W Andrew Lancaster; Morgan N Price; Kelly M Wetmore; Farris L Poole; Adam Deutschbauer; Adam P Arkin; Michael W W Adams
Journal:  Appl Environ Microbiol       Date:  2015-10-09       Impact factor: 4.792

9.  Complete genome sequence of Pseudomonas stutzeri strain RCH2 isolated from a Hexavalent Chromium [Cr(VI)] contaminated site.

Authors:  Romy Chakraborty; Hannah Woo; Paramvir Dehal; Robert Walker; Marcin Zemla; Manfred Auer; Lynne A Goodwin; Alexey Kazakov; Pavel Novichkov; Adam P Arkin; Terry C Hazen
Journal:  Stand Genomic Sci       Date:  2017-02-08

10.  Genome-enabled studies of anaerobic, nitrate-dependent iron oxidation in the chemolithoautotrophic bacterium Thiobacillus denitrificans.

Authors:  Harry R Beller; Peng Zhou; Tina C Legler; Anu Chakicherla; Staci Kane; Tracy E Letain; Peggy A O'Day
Journal:  Front Microbiol       Date:  2013-08-27       Impact factor: 5.640

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