Literature DB >> 20815947

Gene expression profile of renal cell carcinoma clear cell type.

Marcos F Dall'Oglio1, Rafael F Coelho, Katia R M Leite, Juliana M Sousa-Canavez, Paulo S L Oliveira, Miguel Srougi.   

Abstract

PURPOSE: The determination of prognosis in patients with renal cell carcinoma (RCC) is based, classically, on stage and histopathological aspects. The metastatic disease develops in one third of patients after surgery, even in localized tumors. There are few options for treating those patients, and even the new target designed drugs have shown low rates of success in controlling disease progression. Few studies used high throughput genomic analysis in renal cell carcinoma for determination of prognosis. This study is focused on the identification of gene expression signatures in tissues of low-risk, high-risk and metastatic RCC clear cell type (RCC-CCT).
MATERIALS AND METHODS: We analyzed the expression of approximately 55,000 distinct transcripts using the Whole Genome microarray platform hybridized with RNA extracted from 19 patients submitted to surgery to treat RCC-CCT with different clinical outcomes. They were divided into three groups (1) low risk, characterized by pT1, Fuhrman grade 1 or 2, no microvascular invasion RCC; (2) high risk, pT2-3, Fuhrman grade 3 or 4 with, necrosis and microvascular invasion present and (3) metastatic RCC-CCT. Normal renal tissue was used as control.
RESULTS: After comparison of differentially expressed genes among low-risk, high-risk and metastatic groups, we identified a group of common genes characterizing metastatic disease. Among them Interleukin-8 and Heat shock protein 70 were over-expressed in metastasis and validated by real-time polymerase chain reaction.
CONCLUSION: These findings can be used as a starting point to generate molecular markers of RCC-CCT as well as a target for the development of innovative therapies.

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Year:  2010        PMID: 20815947     DOI: 10.1590/s1677-55382010000400004

Source DB:  PubMed          Journal:  Int Braz J Urol        ISSN: 1677-5538            Impact factor:   1.541


  3 in total

1.  LncRNAs expression signatures of renal clear cell carcinoma revealed by microarray.

Authors:  Gan Yu; Weimin Yao; Ji Wang; Xin Ma; Wei Xiao; Heng Li; Ding Xia; Yang Yang; Kangli Deng; Haibing Xiao; Bohan Wang; Xiaolin Guo; Wei Guan; Zhiquan Hu; Yinqi Bai; Hua Xu; Jihong Liu; Xu Zhang; Zhangqun Ye
Journal:  PLoS One       Date:  2012-08-06       Impact factor: 3.240

2.  Full-Length Enrich c-DNA Libraries-Clear Cell-Renal Cell Carcinoma.

Authors:  Sai-Wen Tang; Jung-Yaw Lin
Journal:  J Oncol       Date:  2012-03-20       Impact factor: 4.375

3.  Aberrant expression of long noncoding RNAs in chronic thromboembolic pulmonary hypertension.

Authors:  Song Gu; Guanghui Li; Xitao Zhang; Jun Yan; Jie Gao; Xiangguang An; Yan Liu; Pixiong Su
Journal:  Mol Med Rep       Date:  2014-12-17       Impact factor: 2.952

  3 in total

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