Literature DB >> 20814584

Nonparametric Mixture Models for Supervised Image Parcellation.

Mert R Sabuncu1, B T Thomas Yeo, Koen Van Leemput, Bruce Fischl, Polina Golland.   

Abstract

We present a nonparametric, probabilistic mixture model for the supervised parcellation of images. The proposed model yields segmentation algorithms conceptually similar to the recently developed label fusion methods, which register a new image with each training image separately. Segmentation is achieved via the fusion of transferred manual labels. We show that in our framework various settings of a model parameter yield algorithms that use image intensity information differently in determining the weight of a training subject during fusion. One particular setting computes a single, global weight per training subject, whereas another setting uses locally varying weights when fusing the training data. The proposed nonparametric parcellation approach capitalizes on recently developed fast and robust pairwise image alignment tools. The use of multiple registrations allows the algorithm to be robust to occasional registration failures. We report experiments on 39 volumetric brain MRI scans with expert manual labels for the white matter, cerebral cortex, ventricles and subcortical structures. The results demonstrate that the proposed nonparametric segmentation framework yields significantly better segmentation than state-of-the-art algorithms.

Entities:  

Year:  2009        PMID: 20814584      PMCID: PMC2930597     

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  19 in total

1.  Automated model-based bias field correction of MR images of the brain.

Authors:  K Van Leemput; F Maes; D Vandermeulen; P Suetens
Journal:  IEEE Trans Med Imaging       Date:  1999-10       Impact factor: 10.048

2.  Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains.

Authors:  Torsten Rohlfing; Robert Brandt; Randolf Menzel; Calvin R Maurer
Journal:  Neuroimage       Date:  2004-04       Impact factor: 6.556

3.  Sequence-independent segmentation of magnetic resonance images.

Authors:  Bruce Fischl; David H Salat; André J W van der Kouwe; Nikos Makris; Florent Ségonne; Brian T Quinn; Anders M Dale
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

4.  A unified information-theoretic approach to groupwise non-rigid registration and model building.

Authors:  Carole J Twining; Tim Cootes; Stephen Marsland; Vladimir Petrovic; Roy Schestowitz; Chris J Taylor
Journal:  Inf Process Med Imaging       Date:  2005

5.  A log-Euclidean framework for statistics on diffeomorphisms.

Authors:  Vincent Arsigny; Olivier Commowick; Xavier Pennec; Nicholas Ayache
Journal:  Med Image Comput Comput Assist Interv       Date:  2006

6.  Classifier selection strategies for label fusion using large atlas databases.

Authors:  P Aljabar; R Heckemann; A Hammers; J V Hajnal; D Rueckert
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

7.  Atlas renormalization for improved brain MR image segmentation across scanner platforms.

Authors:  Xiao Han; Bruce Fischl
Journal:  IEEE Trans Med Imaging       Date:  2007-04       Impact factor: 10.048

8.  Effects of registration regularization and atlas sharpness on segmentation accuracy.

Authors:  B T Thomas Yeo; Mert R Sabuncu; Rahul Desikan; Bruce Fischl; Polina Golland
Journal:  Med Image Anal       Date:  2008-06-19       Impact factor: 8.545

9.  Brain anatomical structure segmentation by hybrid discriminative/generative models.

Authors:  Z Tu; K L Narr; P Dollar; I Dinov; P M Thompson; A W Toga
Journal:  IEEE Trans Med Imaging       Date:  2008-04       Impact factor: 10.048

10.  Automatic anatomical brain MRI segmentation combining label propagation and decision fusion.

Authors:  Rolf A Heckemann; Joseph V Hajnal; Paul Aljabar; Daniel Rueckert; Alexander Hammers
Journal:  Neuroimage       Date:  2006-07-24       Impact factor: 6.556

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  3 in total

1.  Segmentation of image ensembles via latent atlases.

Authors:  Tammy Riklin-Raviv; Koen Van Leemput; Bjoern H Menze; William M Wells; Polina Golland
Journal:  Med Image Anal       Date:  2010-06-04       Impact factor: 8.545

2.  A generative model for image segmentation based on label fusion.

Authors:  Mert R Sabuncu; B T Thomas Yeo; Koen Van Leemput; Bruce Fischl; Polina Golland
Journal:  IEEE Trans Med Imaging       Date:  2010-06-17       Impact factor: 10.048

3.  Robust Atlas-Based Segmentation of Highly Variable Anatomy: Left Atrium Segmentation.

Authors:  Michal Depa; Mert R Sabuncu; Godtfred Holmvang; Reza Nezafat; Ehud J Schmidt; Polina Golland
Journal:  Stat Atlases Comput Models Heart       Date:  2010
  3 in total

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