| Literature DB >> 20813030 |
Qi Fang1, Lei Wang, Jiaying Zhu, Yanmin Li, Qisheng Song, David W Stanley, Zunnu-Raen Akhtar, Gongyin Ye.
Abstract
BACKGROUND: The relationships between parasitoids and their insect hosts have attracted attention at two levels. First, the basic biology of host-parasitoid interactions is of fundamental interest. Second, parasitoids are widely used as biological control agents in sustainable agricultural programs. Females of the gregarious endoparasitoid Pteromalus puparum (Hymenoptera: Pteromalidae) inject venom along with eggs into their hosts. P. puparum does not inject polydnaviruses during oviposition. For this reason, P. puparum and its pupal host, the small white butterfly Pieris rapae (Lepidoptera: Pieridae), comprise an excellent model system for studying the influence of an endoparasitoid venom on the biology of the pupal host. P. puparum venom suppresses the immunity of its host, although the suppressive mechanisms are not fully understood. In this study, we tested our hypothesis that P. puparum venom influences host gene expression in the two main immunity-conferring tissues, hemocytes and fat body.Entities:
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Year: 2010 PMID: 20813030 PMCID: PMC2996980 DOI: 10.1186/1471-2164-11-484
Source DB: PubMed Journal: BMC Genomics ISSN: 1471-2164 Impact factor: 3.969
Figure 1Encapsulation analysis. Encapsulation of Sephadex A-50 beads by P. rapae hemocytes. Each histogram represents the mean encapsulation index, and the error bar represents the standard deviation of each mean value (mean ± SD, n = 3). All raw data were transformed by arcsine square root before two-way ANOVA analysis. Histograms annotated with the same letter are not significantly different.
Identified genes from hemocyte subtracted library and their distribution in major functional categories
| Classifications | EST ID | Matches | Organism | Predicted functiona | E-Value |
|---|---|---|---|---|---|
| hemo-115 | AAD09288 | Putative attacin | 4e-13 | ||
| hemo-47 | BAE78585 | Immune inducible protein | 4e-19 | ||
| hemo-101 | BAG12297 | Gallerimycin | 1e-06 | ||
| hemo-36 | AAT94287 | Antimicrobial peptide hinnavin II | 6e-18 | ||
| hemo-35 | AAT94286 | Lysozyme II | 2e-52 | ||
| hemo-363 | AAW24481 | Prophenoloxidase activating enzyme 3 | 2e-12 | ||
| hemo-281 | AAC64004 | Prophenoloxidase activating enzyme precursor | 1e-27 | ||
| hemo-327 | AAW24480 | Prophenol oxidase activating enzyme 1 | 8e-17 | ||
| hemo-176 | BAC15604 | Prophenoloxidase activating factor-III | 3e-10 | ||
| hemo-127 | AAV91007 | Hemolymph proteinase 9 | 2e-27 | ||
| hemo-20 | AAD09285 | Serpin | 4e-39 | ||
| hemo-17 | BAB79277 | Calreticulin | 6e-27 | ||
| hemo-375 | ABB92836 | Scavenger receptor | 3e-32 | ||
| hemo-46 | CAB38429 | Lipopolysaccharide binding protein | 5e-109 | ||
| hemo-357 | BAA03124 | Lectin | 6e-04 | ||
| hemo-53 | EAT41228 | Clathrin coat assembly protein | 2e-47 | ||
| hemo-172 | XP_973182 | N-acetylneuraminic acid phosphate synthase | 4e-04 | ||
| hemo-232 | ABF51446 | Actin-depolymerizing factor 1 | 6e-32 | ||
| hemo-158 | XP_001606290 | Beta-1 tubulin | 5e-43 | ||
| hemo-11 | BAA23126 | BmP109 related to apoptosis | 8e-36 | ||
| hemo-15 | ABK90824 | Cathepsin L-like cysteine proteinase | 1e-41 | ||
| hemo-19 | P00037 | Cytochrome c | 6e-55 | ||
| hemo-308 | EDM11222 | Phosphatidylserine-specific phospholipase A1 | 4e-16 | ||
| hemo-351 | EAT45772 | Citrate synthase | 1e-53 | ||
| hemo-141 | CAA63422 | Vacuolar ATP synthase subunit G | 2e-12 | ||
| hemo-27 | AAY89313 | Cytochrome b | 7e-76 | ||
| hemo-319 | AAF98029 | Cytochrome c oxidase I (COI) gene | 7e-70 | ||
| hemo-37 | AAP42814 | NADH dehydrogenase subunit 3 | 2e-43 | ||
| hemo-118 | AAY89314 | NADH-dehydrogenase subunit 1 | 4e-61 | ||
| hemo-167 | ABC17802 | Pyrimidine 5'-nucleotidase | 3e-10 | ||
| hemo-376 | EAT38872 | Inosine-5-monophosphate dehydrogenase | 1e-109 | ||
| hemo-32 | EAT45824 | Skd/vacuolar sorting | 8e-29 | ||
| hemo-5 | AY351422 | 12 S ribosomal RNA gene | 2e-95 | ||
| hemo-1 | DQ351082 | 16 S ribosomal RNA gene | 0.0 | ||
| hemo-170 | AAL26579 | Ribosomal protein S3A | 2e-90 | ||
| hemo-263 | AAV34860 | Ribosomal protein S4 | 2e-63 | ||
| hemo-257 | AAA20402 | Ribosomal protein S7 | 2e-94 | ||
| hemo-314 | AAK92188 | Ribosomal protein S19 | 5e-67 | ||
| hemo-117 | ABS57440 | Ribosomal protein L7a | 2e-88 | ||
| hemo-273 | AAK76990 | Ribosomal protein L10A | 9e-22 | ||
| hemo-239 | AAV34822 | Ribosomal protein L11 | 2e-28 | ||
| hemo-288 | BAD18973 | Ribosomal protein L13 | 7e-51 | ||
| hemo-155 | AAV34827 | Ribosomal protein L15 | 7e-45 | ||
| hemo-161 | BAD26655 | Ribosomal protein L27A2 | 9e-35 | ||
| hemo-371 | AAL26577 | Ribosomal protein L29 | 1e-23 | ||
| hemo-126 | BAD93614 | Protein disulfide-isomerase like protein | 9e-61 | ||
| hemo-109 | XP_975236 | Transmembrane protein 41B | 2e-69 | ||
| hemo-247 | ABF51296 | Peroxiredoxin | 3e-08 | ||
| hemo-337 | ABF51438 | Transcription initiation factor IIA | 6e-16 | ||
| hemo-128 | XP_972330 | Eukaryotic translation initiation factor 2A | 4e-31 | ||
| hemo-102 | ABF51379 | Eukaryotic translation initiation factor 4A | 5e-42 | ||
| 62 ESTs |
Predicted function: annotation of the subtracted cDNA sequences was based on GenBank/EMBL/DDBJ database using the BLASTX program.
Identified genes from fat body subtracted library and their distribution in major functional categories
| Classifications | EST ID | Matches | Organism | E-Value | |
|---|---|---|---|---|---|
| FB-212 | AAX51192 | Attacin | 7e-40 | ||
| FB-9 | BAA22884 | Lebocin 4 | 5e-17 | ||
| FB-65 | AAT94286 | Lysozyme II | 3e-28 | ||
| FB-226 | P85214 | Proline-rich antimicrobial peptide 1 | 3e-04 | ||
| FB-254 | NP_001040277 | Salivary cysteine-rich peptide | 5e-30 | ||
| FB-42 | AAV91013 | Hemolymph proteinase 16 | 2e-28 | ||
| FB-71 | AAV91003 | Hemolymph proteinase 5 | 7e-42 | ||
| FB-264 | BAC15604 | Prophenoloxidase activating factor-III | 3e-09 | ||
| FB-224 | AAD09285 | Putative serpin | 4e-38 | ||
| FB-286 | AAD09290 | Gram negative binding protein | 2e-43 | ||
| FB-178 | ABF51394 | S-adenosyl-L-homocysteine hydrolase | 1e-82 | ||
| FB-23 | ABG72723 | Protease inhibitor-like protein | 3e-13 | ||
| FB-215 | XP_393519 | Fatty acid-binding protein | 3e-15 | ||
| FB-37 | ABF51271 | Transgelin | 9e-39 | ||
| FB-44 | ABF51380 | F-actin capping protein beta subunit | 1e-36 | ||
| FB-48 | ABF51490 | Troponin C | 2e-72 | ||
| FB-94 | ABF51254 | Microtubule-associated protein | 4e-31 | ||
| FB-136 | DQ443357 | Actin-depolymerizing factor 1 mRNA | 3e-28 | ||
| FB-152 | AAT99314 | Profilin | 2e-23 | ||
| FB-183 | XP_001604074 | Rho GDP-dissociation inhibitor | 2e-34 | ||
| FB-41 | EDS32890 | Testis/seletal muscle specificty phosphatase | 1e-21 | ||
| FB-150 | EDS41027 | Laminin subunit alpha | 2e-30 | ||
| FB-50 | XP_971047 | Der1-like domain family, member 2 | 4e-77 | ||
| FB-56 | BAD52259 | Receptor for activated protein kinase C | 1e-27 | ||
| FB-130 | BAC10621 | Pleiotrophin-like protein | 7e-30 | ||
| FB-205 | ABF18450 | Growth and transformation-dependent protein | 7e-19 | ||
| FB-257 | BAG30771 | SPARC | 8e-53 | ||
| FB-36 | BAA23126 | BmP109 | 4e-106 | ||
| FB-200 | NP_001036881 | Annexin B13 | 2e-65 | ||
| FB-79 | ABE72972 | Cathepsin L | 1e-37 | ||
| FB-102 | ABF51517 | Legumaturain | 5e-49 | ||
| FB-75 | NP_001106229 | Mod(mdg4)-heS00531 | 1e-53 | ||
| FB-7 | ABD36346 | GTP-binding nuclear protein Ran | 1e-64 | ||
| FB-61 | EAT45318 | Gtpase-activating protein | 2e-95 | ||
| FB-45 | L03281 | Met-rich storage protein SP1A | 1e-41 | ||
| FB-276 | Q06342 | Basic juvenile hormone-suppressible protein | 4e-31 | ||
| FB-30 | ABB90008 | Glyceraldehyde-3-phosphate dehydrogenase | 2e-139 | ||
| FB-43 | P31402 | Vacuolar proton pump subunit E | 2e-48 | ||
| FB-210 | NP_001040257 | Cytosolic malate dehydrogenase | 1e-91 | ||
| FB-230 | AAW39031 | Cytochrome c oxidase subunit I | 1e-64 | ||
| FB-124 | ACB49306 | Cytochrome c oxidase subunit III | 2e-88 | ||
| FB-211 | ABD36116 | Electron-transfer-flavoprotein beta polypeptide | 3e-93 | ||
| FB-76 | ABA00463 | Phosphoglyceromutase | 7e-60 | ||
| FB-70 | XP_001655220 | N-acetylglucosamine-6-phosphate deacetylase | 1e-13 | ||
| FB-231 | NP_001040128 | Glucosamine-6-phosphate N-acetyltransferase | 9e-89 | ||
| FB-40 | XP_973042 | L-3-hydroxyacyl-CoA dehydrogenase | 2e-48 | ||
| FB-157 | AAT72922 | Sterol carrier protein | 3e-23 | ||
| FB-20 | AAG34698 | Apolipophorin-III-like protein | 5e-28 | ||
| FB-33 | AAT76806 | Apolipophorin | 3e-24 | ||
| FB-260 | DQ482581 | Lipophorin receptor mRNA | 6e-38 | ||
| FB-168 | AAG44960 | Hexamerin 2 | 3e-70 | ||
| FB-66 | BAA34090 | Arylphorin | 8e-24 | ||
| FB-78 | CAB55603 | Moderately methionine rich storage protein | 9e-103 | ||
| FB-22 | DQ351082 | 16 S ribosomal RNA gene | 0 | ||
| FB-15 | AAV34860 | Ribosomal protein S4 | 1e-31 | ||
| FB-52 | ABG81962 | Putative S5e ribosomal protein | 6e-49 | ||
| FB-144 | Q94624 | 40 S ribosomal protein S6 | 4e-105 | ||
| FB-57 | AAV34865 | Ribosomal protein S9 | 1e-67 | ||
| FB-199 | AAK92188 | Ribosomal protein S19 | 4e-41 | ||
| FB-104 | CAD25759 | 40 S ribosomal protein S23 | 2e-37 | ||
| FB-148 | AAL62468 | Ribosomal protein L3 | 4e-29 | ||
| FB-134 | ABS57444 | Ribosomal protein L12 | 2e-56 | ||
| FB-101 | AAV34826 | Ribosomal protein L14 | 3e-83 | ||
| FB-34 | AAG45936 | Protein disulfide isomerase | 2e-86 | ||
| FB-100 | BAD93614 | Protein disulfide-isomerase like protein | 5e-79 | ||
| FB-49 | EAT43532 | Seryl-tRNA synthetase | 1e-88 | ||
| FB-95 | ABD36309 | Homocysteine S-methyltransferase | 6e-31 | ||
| FB-53 | XP_001866517 | 26 S protease regulatory subunit 6A | 6e-89 | ||
| FB-204 | EAT35416 | 26 S proteasome subunit S9 | 3e-21 | ||
| FB-86 | XP_391945 | Proteasome p44.5 subunit | 8e-30 | ||
| FB-120 | XP_001897032 | Polyubiquitin precursor | 5e-35 | ||
| FB-234 | EAT39130 | Ubiquitin fusion degradaton protein | 1e-17 | ||
| FB-247 | EDP34630 | Ubiquitin | 2e-24 | ||
| FB-273 | ABF51361 | Zinc-containing alcohol dehydrogenase | 6e-59 | ||
| FB-3 | AAF23078 | Glutathione S-transferase | 2e-73 | ||
| FB-91 | BAD27263 | Transferrin | 2e-110 | ||
| FB-256 | P22297 | Transferrin precursor | 5e-116 | ||
| FB-208 | ABM92425 | Ferritin HCH | 7e-89 | ||
| FB-2 | XP_001605887 | Mitochondrial carrier protein ymc | 9e-35 | ||
| FB-14 | XP_968248 | Outer mitochondrial membrane translocase | 2e-30 | ||
| FB-265 | AAS91007 | Kiser | 1e-93 | ||
| FB-228 | ABF51232 | Transmembrane trafficking protein | 7e-39 | ||
| FB-113 | CAD26198 | Heat shock related 70kDa protein | 1e-38 | ||
| FB-115 | ABM88156 | Heat shock cognate 70 | 5e-101 | ||
| FB-263 | BAE48744 | Heat shock protein 19.5 | 3e-25 | ||
| FB-128 | ABR27869 | DNA-binding nuclear protein p8 | 4e-19 | ||
| FB-60 | AAY82465 | Ribosome-associated membrane protein 4 | 3e-28 | ||
| FB-138 | ABD36103 | DnaJ-like protein | 3e-16 | ||
| FB-269 | XP_969600 | Peroxidase precursor | 8e-35 | ||
| FB-35 | XP_623868 | ATP-dependent helicase TfIIF-beta | 8e-43 | ||
| FB-255 | AAT51707 | DEAD box RNA helicase | 3e-19 | ||
| FB-25 | ABF51379 | Eukaryotic translation initiation factor 4A | 2e-49 | ||
| FB-114 | NP_001086988 | Eukaryotic translation initiation factor 2C | 3e-32 | ||
| FB-252 | ABF71565 | Translation elongation factor 2 | 1e-117 | ||
| FB-99 | BAB16696 | En10 protein | 1e-91 | ||
| FB-68 | AAZ31205 | Elongation factor-1 alpha | 2e-55 | ||
| FB-81 | BAB21109 | Elongation factor 1 delta | 9e-26 | ||
| FB-218 | ABH10804 | Signal recognition particle 68 kDa protein | 6e-31 | ||
| 123 ESTs |
The representation is same as the footnote of the Table 1.
Figure 2Annotation of the genes identified in host hemocytes. Annotation of the genes identified in host hemocyte forward SSH library. The identified genes were categorized into nine groups as indicated in the figure. (A): Gene transcriptional composition. (B): Gene frequency. The total number of the sequenced ESTs assigned into each group.
Figure 3Annotation of the genes identified in host fat body. Annotation of the genes identified in host fat body forward SSH library. The identified genes were categorized into nine groups. (A): Gene transcriptional composition. (B): Gene frequency. The representation is described above.
Figure 4Distribution of immune response related genes in hemocyte and fat body subtracted libraries. Numbers in parentheses are total immune response related gene cluster from each library. Genes listed in the box occurred in both libraries. Details for the genes are listed in Tables 1 & 2.
Figure 5Expression profiles of 40 candidate genes. Expression profiles of 40 Immune-related candidate genes (19 from hemocytes SSH library and 21 from fat body SSH library) in host immune tissues. These genes were analyzed by semi-quantitative RT-PCR, using the P. rapae 18 S rRNA as a reference gene. The EST ID of the genes and the PCR primer sequences are given in additional file 4. Gene expression in host hemocytes and fat body cells at 1 h PI, "N" represents the negative control, treatment with Pringle's saline buffer. "I" represents the immune-inducible genes following Sephadex bead injection, and "S" denotes the immune-suppressed following venom treatment. Hemocytes and fat body genes are identified by the red lines.
Figure 6Differential activities of enzymes. Activities of antimicrobial and detoxification enzymes following challenge with buffer (negative control, white bars), Sephadex beads (immune challenge, black bars) and Sephadex beads plus venom (immune suppression, patterned bars). The indicated tissues were prepared for enzyme assays at 1 h PI. Panel (A) shows PO activity, panel (B) shows lysozyme activity and panel (C) shows GST activity. The units of enzyme activities are defined in M&Ms. Values are means ± SD. Histogram bars annotated with the same letter are not significantly different for each tested tissue.