| Literature DB >> 20811515 |
Judy Shamoun-Baranes1, Willem Bouten, E Emiel van Loon.
Abstract
Atmospheric dynamics strongly influence the migration of flying organisms. They affect, among others, the onset, duration and cost of migration, migratory routes, stop-over decisions, and flight speeds en-route. Animals move through a heterogeneous environment and have to react to atmospheric dynamics at different spatial and temporal scales. Integrating meteorology into research on migration is not only challenging but it is also important, especially when trying to understand the variability of the various aspects of migratory behavior observed in nature. In this article, we give an overview of some different modeling approaches and we show how these have been incorporated into migration research. We provide a more detailed description of the development and application of two dynamic, individual-based models, one for waders and one for soaring migrants, as examples of how and why to integrate meteorology into research on migration. We use these models to help understand underlying mechanisms of individual response to atmospheric conditions en-route and to explain emergent patterns. This type of models can be used to study the impact of variability in atmospheric dynamics on migration along a migratory trajectory, between seasons and between years. We conclude by providing some basic guidelines to help researchers towards finding the right modeling approach and the meteorological data needed to integrate meteorology into their own research.Entities:
Mesh:
Year: 2010 PMID: 20811515 PMCID: PMC2931313 DOI: 10.1093/icb/icq011
Source DB: PubMed Journal: Integr Comp Biol ISSN: 1540-7063 Impact factor: 3.326
Fig. 1A simplified representation of the different spatio-temporal scales of atmospheric dynamics that may influence instantaneous behavioral responses, resulting in short-term (instantaneous) and longer-term effects. Carry-over effects include not only inter-annual effects (e.g. population size or breeding success), but longer-term effects that may have evolutionary consequences (e.g. shaping migration routes). For example, instantaneous changes in flight behavior would influence instantaneous flight speed, the timing of migration within a migration season and could also lead to carry-over effects such as the timing of breeding or breeding success.
An overview of different types of concept- and data-driven models and their characteristics
| Requirement for creating the model | ||||||
|---|---|---|---|---|---|---|
| Name | Description | Conceptual understanding of the system | Numerical and data processing skills | Observations on state variables | Possibilities for calibration | Frequency of use |
| SC | Static Concept-based model | Intermediate | Low | Few | Easy, many methods | Intermediate |
| DI | Dynamic IBM | Intermediate | Intermediate | Intermediate | Difficult, few methods | Intermediate |
| DC | Dynamic Continuum-based model | High | High | Intermediate | Intermediate, few methods | Low |
| SD | Static Data-based model | Low | Low | Intermediate | Easy, many methods | High |
| DD | Dynamic Data-based model | Low | High | Many | Intermediate, few methods | Low |
Frequency of use in migration studies is provided in the last column; for references to specific studies see Table 2.
aIn this context, static means that the process being studied is either in steady state or that there is no influence of previous states on the current state.
bIndividual-based: model state variables refer to properties of an individual; continuum based: model state variables refer to population properties. State variables are model-entities which are updated at each model time step with a difference equation in dynamic models and are usually comparable to the dependent variables in static models.
A selection of studies on the influence of atmospheric conditions on animal migration, including focal species or group, types of data used, geographic region of study, type of model, and relevant reference
| Effects on migration | Species/group | Migration data | Meteorological variable: data source | Geographic region | Model type | References |
|---|---|---|---|---|---|---|
| Flight behavior: altitude | Nocturnal migratory birds | Tracking radar | Wind | Sahara | SC | Schmaljohann et al. |
| Flight behavior: altitude | Soaring avian migrants | Motorized glider | Boundary layer height and vertical lift: boundary layer convective model | Israel | SD | Shamoun-Baranes et al. |
| Flight behavior: altitude | Nocturnal migratory insects | Radar | Various: numerical weather prediction model, the Unified Model | UK | SD | Wood et al. |
| Take off decisions | Arctic geese | Ringing data | Onset of spring proxy: NDVI | Palearctic flyway | DI | Bauer et al. |
| Take off decisions | Bar tailed godwit | Satellite telemetry | Sea level pressure, wind | Pacific ocean flyway | Descriptive no computer model | Gill et al. |
| Take off decisions | Not relevant | None | Wind assistance or no assistance: no data | Not relevant | SC | Weber et al. |
| Take off decisions | Green darners | Radio telemetry | Wind | Northeast USA | SD | Wikelski et al. |
| Migration intensity | Nocturnal migratory birds | Radar | Wind | The Netherlands | SD | van Belle et al. |
| Migration intensity | Nocturnal passerine migration | Radar and visual observations | Wind | Southeastern USA | SD | Able |
| Migration intensity | Black-cherry aphids and diamond-back moths | Radar and insect traps | Wind | Finland | DC | Leskinen et al. |
| Speed | Turkey vulture | Satellite telemetry | Wind speed, turbulent kinetic energy, cloud height: North American regional reanalysis data | Eastern North American flyway | DD | Mandel et al. |
| Speed | Red knots | Visual observations | Wind | Afro–Siberian flyway | DI | Shamoun-Baranes et al. |
| Direction/Orientation | Reed warbler | Radio telemetry | Wind | Sweden | SD | Åkesson et al. |
| Direction/Orientation | Moths and butterflies | Radar | Wind | UK | SD | Chapman et al. |
| Timing | Soaring avian migrants | Visual observations, Satellite telemetry | Barometric pressure, temperature, precipitable water: NCEP reanalysis data | Western Palearctic (eastern) flyway | SC | Shamoun-Baranes et al. |
| Timing | Passerine migrants | Ringing data | North Atlantic Oscillation | Europe and Scandinavia | SD | Jonzen et al. |
| Arrival mass | Western sandpipers | Biometric measurements | Wind | North American Pacific Coast | DI | Butler et al. |
| Route | Silver Y (noctuid moth) | Radar | Wind | United Kingdom, Northwest Europe | DI | Chapman et al. |
| Route | Golden Eagles | Visual observations | Wind (implicit): digital elevation model | Central Pennsylvania | DC | Brandes and Ombalski |
| Survival | Simulated nocturnal passerine migrant | Literature | Wind | Western Palearctic migration | DI | Erni et al. |
| Mass, population dynamics | Houbara bustard Stonechat | Literature | Winter severity (implicit): no data | Not directly relevant | DC | Stöcker and Weihs |
Type of model is described in more detail in Table 1. The terms used in the column entitled ‘Effects on migration’ are adapted to roughly follow the framework provided in Fig. 1 for comparative purposes and, thus, do not always follow the exact terms used in the original study. Similarly, although many effects may be studied with one model, we generally highlight the effect that was the focus of the study. For suggestions on where to find different sources of meteorological data, some of which are mentioned in this table, see Table 3.
aWind speed and direction.
bWhite stork, honey buzzard, lesser spotted eagle.
cNDVI, normalized difference vegetation index.
dMigration intensity can also be considered a proxy for takeoff decisions.
An overview of the most relevant temporal scales (indicated by an X) for different types of meteorological data that can be incorporated into models of bird migration. Examples of on-line resources for such data are also provided
| Temporal scale | Large eddy simulation | Regional numerical mesoscale models | Station observations | Global/continental reanalysis data | Global circulation indices |
|---|---|---|---|---|---|
| Minutes | X | X | – | – | – |
| Hourly | – | X | X | X | – |
| Daily | – | X | X | X | – |
| Seasonal | – | – | X | X | X |
| On-line resource | Generally none | MM5 | ECA&D | NCEP reanalysis data | NAO index |
The higher the spatial and temporal resolution of the data, generally the harder it is to find on the internet and such models must be run for the study of interest.
aPSU/NCAR mesoscale model (MM5); http://www.mmm.ucar.edu/prod/rt/pages/rt.html; Grell et al. 1994.
bECA&D European climate and assessment dataset; http://eca.knmi.nl/; Klok and Klein Tank 2009.
cNCEP-NCAR reanalysis data; http://www.esrl.noaa.gov/psd/data/reanalysis/reanalysis.shtml; Kalnay et al. 1996.
dNAO (North Atlantic Oscillation) index; http://www.cgd.ucar.edu/cas/jhurrell/indices.html; Hurrell et al. 2003.
Fig. 2A forward simulation of the migration of red knots taking off on May 1, 1986. Upward-pointing and downward-pointing triangles indicate wintering site (simulated start location) and Wadden sea stopover site (simulated end location) respectively. The open circle marks the location of the emergency stopover site on the French Atlantic coast. Black circles indicate location at each time step. Arrows indicate the speed and direction of the wind at each location and the dotted line shows the flight trajectory. The shorter the distance between circles, the slower is the ground speed due to disadvantageous winds.
Fig. 33D trajectories of simulated migration of white storks. Thermals are indicated as grey cylinders; the destination is indicated by a gray box. Each trajectory represents the movement of an individual during the simulation. When in a thermal, birds climb vertically until they reach the top; they then glide (losing altitude) towards the next thermal if it can be sensed and reached by the birds. Otherwise the bird glides first to the destination, until another thermal can be utilized. In this simulation, a bird first searches for the most distant thermal containing other birds.