Literature DB >> 20805515

Catalytic and chaperone-like functions in an intrinsically disordered protein associated with desiccation tolerance.

Sohini Chakrabortee1, Filip Meersman, Gabriele S Kaminski Schierle, Carlos W Bertoncini, Brian McGee, Clemens F Kaminski, Alan Tunnacliffe.   

Abstract

Intrinsically disordered proteins (IDPs) lack well-defined structure but are widely represented in eukaryotic proteomes. Although the functions of most IDPs are not understood, some have been shown to have molecular recognition and/or regulatory roles where their disordered nature might be advantageous. Anhydrin is an uncharacterized IDP induced by dehydration in an anhydrobiotic nematode, Aphelenchus avenae. We show here that anhydrin is a moonlighting protein with two novel, independent functions relating to desiccation tolerance. First, it has a chaperone-like activity that can reduce desiccation-induced enzyme aggregation and inactivation in vitro. When expressed in a human cell line, anhydrin localizes to the nucleus and reduces the propensity of a polyalanine expansion protein associated with oculopharyngeal muscular dystrophy to form aggregates. This in vivo activity is distinguished by a loose association of anhydrin with its client protein, consistent with a role as a molecular shield. In addition, anhydrin exhibits a second function as an endonuclease whose substrates include supercoiled, linear, and chromatin linker DNA. This nuclease activity could be involved in either repair of desiccation-induced DNA damage incurred during anhydrobiosis or in apoptotic or necrotic processes, for example, but it is particularly unexpected for anhydrin because IDP functions defined to date anticorrelate with enzyme activity. Enzymes usually require precise three-dimensional positioning of residues at the active site, but our results suggest this need not be the case. Anhydrin therefore extends the range of IDP functional categories to include catalysis and highlights the potential for the discovery of new functions in disordered proteomes.

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Year:  2010        PMID: 20805515      PMCID: PMC2941266          DOI: 10.1073/pnas.1006276107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

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Review 2.  Coupling of folding and binding for unstructured proteins.

Authors:  H Jane Dyson; Peter E Wright
Journal:  Curr Opin Struct Biol       Date:  2002-02       Impact factor: 6.809

Review 3.  Structural disorder throws new light on moonlighting.

Authors:  Peter Tompa; Csilla Szász; László Buday
Journal:  Trends Biochem Sci       Date:  2005-09       Impact factor: 13.807

4.  Rules for nuclear localization sequence recognition by karyopherin beta 2.

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5.  Fuzzy complexes: polymorphism and structural disorder in protein-protein interactions.

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Journal:  Trends Biochem Sci       Date:  2007-11-28       Impact factor: 13.807

6.  Modularity of intrinsic disorder in the human proteome.

Authors:  Melissa M Pentony; David T Jones
Journal:  Proteins       Date:  2010-01

7.  Universal behavior of the osmotically compressed cell and its analogy to the colloidal glass transition.

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Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-11       Impact factor: 11.205

8.  Prediction and functional analysis of native disorder in proteins from the three kingdoms of life.

Authors:  J J Ward; J S Sodhi; L J McGuffin; B F Buxton; D T Jones
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9.  p27 binds cyclin-CDK complexes through a sequential mechanism involving binding-induced protein folding.

Authors:  Eilyn R Lacy; Igor Filippov; William S Lewis; Steve Otieno; Limin Xiao; Sonja Weiss; Ludger Hengst; Richard W Kriwacki
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Journal:  Nat Struct Mol Biol       Date:  2009-11-15       Impact factor: 15.369

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  30 in total

1.  Folding factors and partners for the intrinsically disordered protein micro-exon gene 14 (MEG-14).

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2.  Expanding the proteome: disordered and alternatively folded proteins.

Authors:  H Jane Dyson
Journal:  Q Rev Biophys       Date:  2011-07-01       Impact factor: 5.318

3.  Does water stress promote the proteome-wide adjustment of intrinsically disordered proteins in plants?

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Journal:  Cell Stress Chaperones       Date:  2018-06-02       Impact factor: 3.667

Review 4.  Structural metamorphism and polymorphism in proteins on the brink of thermodynamic stability.

Authors:  Prakash Kulkarni; Tsega L Solomon; Yanan He; Yihong Chen; Philip N Bryan; John Orban
Journal:  Protein Sci       Date:  2018-09-24       Impact factor: 6.725

5.  A LEA 4 protein up-regulated by ABA is involved in drought response in maize roots.

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Review 6.  Advantages of proteins being disordered.

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Journal:  Protein Sci       Date:  2014-03-17       Impact factor: 6.725

7.  Phosphorylation-induced conformational dynamics in an intrinsically disordered protein and potential role in phenotypic heterogeneity.

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Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-13       Impact factor: 11.205

8.  A FRET sensor for non-invasive imaging of amyloid formation in vivo.

Authors:  Gabriele S Kaminski Schierle; Carlos W Bertoncini; Fiona T S Chan; Annemieke T van der Goot; Stefanie Schwedler; Jeremy Skepper; Simon Schlachter; Tjakko van Ham; Alessandro Esposito; Janet R Kumita; Ellen A A Nollen; Christopher M Dobson; Clemens F Kaminski
Journal:  Chemphyschem       Date:  2011-02-09       Impact factor: 3.102

9.  Intrinsically disordered proteins as molecular shields.

Authors:  Sohini Chakrabortee; Rashmi Tripathi; Matthew Watson; Gabriele S Kaminski Schierle; Davy P Kurniawan; Clemens F Kaminski; Michael J Wise; Alan Tunnacliffe
Journal:  Mol Biosyst       Date:  2011-09-09

Review 10.  Pleiotropic roles of late embryogenesis abundant proteins of Deinococcus radiodurans against oxidation and desiccation.

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