Literature DB >> 20805403

Microbe hunting.

W Ian Lipkin1.   

Abstract

Platforms for pathogen discovery have improved since the days of Koch and Pasteur; nonetheless, the challenges of proving causation are at least as daunting as they were in the late 1800 s. Although we will almost certainly continue to accumulate low-hanging fruit, where simple relationships will be found between the presence of a cultivatable agent and a disease, these successes will be increasingly infrequent. The future of the field rests instead in our ability to follow footprints of infectious agents that cannot be characterized using classical microbiological techniques and to develop the laboratory and computational infrastructure required to dissect complex host-microbe interactions. I have tried to refine the criteria used by Koch and successors to prove linkage to disease. These refinements are working constructs that will continue to evolve in light of new technologies, new models, and new insights. What will endure is the excitement of the chase. Happy hunting!

Mesh:

Substances:

Year:  2010        PMID: 20805403      PMCID: PMC2937520          DOI: 10.1128/MMBR.00007-10

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  138 in total

Review 1.  Life in extreme environments.

Authors:  L J Rothschild; R L Mancinelli
Journal:  Nature       Date:  2001-02-22       Impact factor: 49.962

2.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

3.  Intravenous immunoglobulins neutralize blocking antibodies in Guillain-Barré syndrome.

Authors:  Brigitte Buchwald; Raheleh Ahangari; Andreas Weishaupt; Klaus V Toyka
Journal:  Ann Neurol       Date:  2002-06       Impact factor: 10.422

4.  Role of neuraminidase in lethal synergism between influenza virus and Streptococcus pneumoniae.

Authors:  Jonathan A McCullers; Kimberly C Bartmess
Journal:  J Infect Dis       Date:  2003-03-06       Impact factor: 5.226

5.  Mice transgenic for a human porcine endogenous retrovirus receptor are susceptible to productive viral infection.

Authors:  Y Martina; K T Marcucci; S Cherqui; A Szabo; T Drysdale; U Srinivisan; C A Wilson; C Patience; D R Salomon
Journal:  J Virol       Date:  2006-04       Impact factor: 5.103

6.  ANTIVIRAL ACTIVITY OF 1-ADAMANTANAMINE (AMANTADINE).

Authors:  W L DAVIES; R R GRUNERT; R F HAFF; J W MCGAHEN; E M NEUMAYER; M PAULSHOCK; J C WATTS; T R WOOD; E C HERMANN; C E HOFFMANN
Journal:  Science       Date:  1964-05-15       Impact factor: 47.728

7.  A new arenavirus in a cluster of fatal transplant-associated diseases.

Authors:  Gustavo Palacios; Julian Druce; Lei Du; Thomas Tran; Chris Birch; Thomas Briese; Sean Conlan; Phenix-Lan Quan; Jeffrey Hui; John Marshall; Jan Fredrik Simons; Michael Egholm; Christopher D Paddock; Wun-Ju Shieh; Cynthia S Goldsmith; Sherif R Zaki; Mike Catton; W Ian Lipkin
Journal:  N Engl J Med       Date:  2008-02-06       Impact factor: 91.245

8.  Recovery of divergent avian bornaviruses from cases of proventricular dilatation disease: identification of a candidate etiologic agent.

Authors:  Amy L Kistler; Ady Gancz; Susan Clubb; Peter Skewes-Cox; Kael Fischer; Katherine Sorber; Charles Y Chiu; Avishai Lublin; Sara Mechani; Yigal Farnoushi; Alexander Greninger; Christopher C Wen; Scott B Karlene; Don Ganem; Joseph L DeRisi
Journal:  Virol J       Date:  2008-07-31       Impact factor: 4.099

9.  Multiplex MassTag-PCR for respiratory pathogens in pediatric nasopharyngeal washes negative by conventional diagnostic testing shows a high prevalence of viruses belonging to a newly recognized rhinovirus clade.

Authors:  Samuel R Dominguez; Thomas Briese; Gustavo Palacios; Jeffrey Hui; Joseph Villari; Vishal Kapoor; Rafal Tokarz; Mary P Glodé; Marsha S Anderson; Christine C Robinson; Kathryn V Holmes; W Ian Lipkin
Journal:  J Clin Virol       Date:  2008-10       Impact factor: 3.168

10.  Human rhinovirus group C infection in children with lower respiratory tract infection.

Authors:  Zichun Xiang; Richard Gonzalez; Zhengde Xie; Yan Xiao; Lan Chen; Yongjun Li; Chunyan Liu; Yinghui Hu; Yuan Yao; Suyun Qian; Rong Geng; Guy Vernet; Gláucia Paranhos-Baccalà; Kunling Shen; Qi Jin; Jianwei Wang
Journal:  Emerg Infect Dis       Date:  2008-10       Impact factor: 6.883

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  63 in total

1.  Homology-independent discovery of replicating pathogenic circular RNAs by deep sequencing and a new computational algorithm.

Authors:  Qingfa Wu; Ying Wang; Mengji Cao; Vitantonio Pantaleo; Joszef Burgyan; Wan-Xiang Li; Shou-Wei Ding
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-15       Impact factor: 11.205

Review 2.  Next-generation sequencing in clinical virology: Discovery of new viruses.

Authors:  Sibnarayan Datta; Raghvendra Budhauliya; Bidisha Das; Soumya Chatterjee; Vijay Veer
Journal:  World J Virol       Date:  2015-08-12

Review 3.  Complementary approaches to diagnosing marine diseases: a union of the modern and the classic.

Authors:  Colleen A Burge; Carolyn S Friedman; Rodman Getchell; Marcia House; Kevin D Lafferty; Laura D Mydlarz; Katherine C Prager; Kathryn P Sutherland; Tristan Renault; Ikunari Kiryu; Rebecca Vega-Thurber
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-03-05       Impact factor: 6.237

4.  The perils of pathogen discovery: origin of a novel parvovirus-like hybrid genome traced to nucleic acid extraction spin columns.

Authors:  Samia N Naccache; Alexander L Greninger; Deanna Lee; Lark L Coffey; Tung Phan; Annie Rein-Weston; Andrew Aronsohn; John Hackett; Eric L Delwart; Charles Y Chiu
Journal:  J Virol       Date:  2013-09-11       Impact factor: 5.103

5.  Responding to emerging diseases: reducing the risks through understanding the mechanisms of emergence.

Authors:  John S Mackenzie
Journal:  Western Pac Surveill Response J       Date:  2011-03-07

Review 6.  Skin microbiome: genomics-based insights into the diversity and role of skin microbes.

Authors:  Heidi H Kong
Journal:  Trends Mol Med       Date:  2011-03-04       Impact factor: 11.951

7.  Neurotropic astrovirus in cattle with nonsuppurative encephalitis in Europe.

Authors:  Ilias G Bouzalas; Daniel Wüthrich; Julia Walland; Cord Drögemüller; Andreas Zurbriggen; Marc Vandevelde; Anna Oevermann; Rémy Bruggmann; Torsten Seuberlich
Journal:  J Clin Microbiol       Date:  2014-07-02       Impact factor: 5.948

Review 8.  Immunology in the clinic review series; focus on type 1 diabetes and viruses: the enterovirus link to type 1 diabetes: critical review of human studies.

Authors:  L C Stene; M Rewers
Journal:  Clin Exp Immunol       Date:  2012-04       Impact factor: 4.330

9.  Metagenomic analysis of the dust particles collected from the suction tube and the suction funnel of a dermatological laser smoke evacuator system.

Authors:  Ga-Eun Lee; Jin Ju Kim; Hei Sung Kim; Woo Jun Sul
Journal:  Lasers Med Sci       Date:  2020-10-20       Impact factor: 3.161

Review 10.  MSMB variation and prostate cancer risk: clues towards a possible fungal etiology.

Authors:  Siobhan Sutcliffe; Angelo M De Marzo; Karen S Sfanos; Martin Laurence
Journal:  Prostate       Date:  2014-01-24       Impact factor: 4.104

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