Literature DB >> 20800535

Microfluidic landscapes for evolution.

Brian M Paegel1.   

Abstract

Evolution at its heart is an iterative algorithm composed of three steps: selection, amplification and mutagenesis. This algorithm can be applied to complex inputs such as populations of whole organisms and viruses, or mixtures of bare nucleic acids and proteins. The output is the same: evolutionary adaptation of new and improved function subject to selection. Recent breakthroughs in microfluidic technology have introduced automation and process monitoring to in vitro evolution, and reproducible preparation of emulsions and other multi-phase reaction landscapes. It is at this intersection of compartmentalization and in vitro evolution where miniaturization is again redefining experimental design in contemporary chemistry and biology.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20800535      PMCID: PMC2953605          DOI: 10.1016/j.cbpa.2010.07.023

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  39 in total

1.  Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase.

Authors:  C Tuerk; L Gold
Journal:  Science       Date:  1990-08-03       Impact factor: 47.728

2.  High-throughput screening of enzymes by retroviral display using droplet-based microfluidics.

Authors:  Lucia Granieri; Jean-Christophe Baret; Andrew D Griffiths; Christoph A Merten
Journal:  Chem Biol       Date:  2010-03-26

3.  Controlling the selection stringency of phage display using a microfluidic device.

Authors:  Yanli Liu; Jonathan D Adams; Kelisha Turner; Frank V Cochran; Sanjiv Sam Gambhir; H Tom Soh
Journal:  Lab Chip       Date:  2009-03-03       Impact factor: 6.799

4.  Automated RNA selection.

Authors:  J C Cox; P Rudolph; A D Ellington
Journal:  Biotechnol Prog       Date:  1998 Nov-Dec

5.  Continuous in vitro evolution of catalytic function.

Authors:  M C Wright; G F Joyce
Journal:  Science       Date:  1997-04-25       Impact factor: 47.728

6.  Microchemostat-microbial continuous culture in a polymer-based, instrumented microbioreactor.

Authors:  Zhiyu Zhang; Paolo Boccazzi; Hyun-Goo Choi; Gerardo Perozziello; Anthony J Sinskey; Klavs F Jensen
Journal:  Lab Chip       Date:  2006-04-20       Impact factor: 6.799

7.  A PMMA microfluidic droplet platform for in vitro protein expression using crude E. coli S30 extract.

Authors:  N Wu; Y Zhu; S Brown; J Oakeshott; T S Peat; R Surjadi; C Easton; P W Leech; B A Sexton
Journal:  Lab Chip       Date:  2009-10-01       Impact factor: 6.799

8.  Man-made cell-like compartments for molecular evolution.

Authors:  D S Tawfik; A D Griffiths
Journal:  Nat Biotechnol       Date:  1998-07       Impact factor: 54.908

9.  Template-directed synthesis of a genetic polymer in a model protocell.

Authors:  Sheref S Mansy; Jason P Schrum; Mathangi Krishnamurthy; Sylvia Tobé; Douglas A Treco; Jack W Szostak
Journal:  Nature       Date:  2008-06-04       Impact factor: 49.962

10.  Preparation of large monodisperse vesicles.

Authors:  Ting F Zhu; Jack W Szostak
Journal:  PLoS One       Date:  2009-04-06       Impact factor: 3.240

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