| Literature DB >> 20796317 |
Zuoguang Wang1, Ya Liu, Jieling Liu, Kuo Liu, Yuqin Lou, Jie Wen, Qiuli Niu, Shaojun Wen, Zhaosu Wu.
Abstract
BACKGROUND: Genetic variation is thought to contribute to the etiology of hypertension, and E-selectin is a candidate essential hypertension-associated gene. This study thus sought to investigate possible genetic associations between the T1880C, C602A and T1559C polymorphisms of E-selectin and essential hypertension.Entities:
Mesh:
Substances:
Year: 2010 PMID: 20796317 PMCID: PMC2940768 DOI: 10.1186/1471-2350-11-127
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Location of SNPs analyzed in the present case-control study
| dbSNP rs#cluster ID | Contig position | Region | Function | dbSNP allele | Protein residue |
|---|---|---|---|---|---|
| T1880C/rs5355 | 20186225 | Exon_13 | missense | T/C | Phe/Leu |
| C602A/rs5361 | 20191415 | Exon_4 | missense | C/A | Tyr/His |
| T1559C/rs5368 | 20187301 | Exon_9 | missense | T/C | Arg/Ser |
Clinical characteristics of normotensive and essential hypertensive participants
| Index | Total | Male | Female | ||||||
|---|---|---|---|---|---|---|---|---|---|
| NT(n = 495) | EH(n = 490) | P | NT(n = 293) | EH(n = 316) | P | NT(n = 202) | EH(n = 174) | P | |
| 51.50 ± 8.92 | 53.75 ± 7.96 | 0.85 | 54.72 ± 5.32 | 52.1 ± 7.64 | 0.76 | 51.50 ± 7.91 | 52.69 ± 6.88 | 0.91 | |
| 22.12 ± 3.12 | 26.41 ± 3.36 | <0.05* | 22.1 ± 2.6 | 24.4 ± 2. 2 | 0.58 | 23.9 ± 2.7 | 27.63 ± 3.05 | 0.03* | |
| 114.38 ± 11.89 | 140.29 ± 17.68 | <0.01** | 106.6 ± 23. 5 | 142. 4 ± 20. 7 | <0.01** | 104. 5 ± 24. 1 | 145.63 ± 19.42 | <0.01** | |
| 75.28 ± 9.10 | 90.44 ± 12.44 | <0.01** | 80.6 ± 3.7 | 90.1 ± 10.4 | 0.01* | 72.5 ± 9.6 | 94.87 ± 11.47 | <0.01** | |
| 1.91 ± 0.50 | 2.03 ± 0.63 | 0.63 | 1.07 ± 0. 62 | 1. 12 ± 0.59 | 0.72 | 1.10 ± 0.65 | 1.32 ± 0.55 | 0.59 | |
| 4.88 ± 1.01 | 5.38 ± 1.73 | <0.05* | 4.51 ± 1.22 | 4.59 ± 1.21 | 0.93 | 4.64 ± 1.17 | 5.36 ± 1.08 | <0.05* | |
| 1.62 ± 0.50 | 1.71 ± 0.61 | 0.67 | 0.96 ± 0.73 | 1.01 ± 0. 32 | 0.71 | 1.79 ± 0.31 | 1.63 ± 0.42 | 0.64 | |
| 1.91 ± 1.79 | 2.90 ± 1.63 | <0.01** | 2.08 ± 1.46 | 2.40 ± 1.48 | 0.05 | 2.27 ± 1.41 | 3.18 ± 1.25 | <0.01** | |
| 4.61 ± 1.45 | 4.98 ± 1.48 | 0.78 | 4.30 ± 1.52 | 4.40 ± 1.41 | 0.91 | 4.60 ± 1.39 | 4.67 ± 1.74 | 0.95 | |
| 5.03 ± 1.17 | 5.89 ± 1.39 | 0.55 | 5.08 ± 1.11 | 6.12 ± 1. 09 | 0.52 | 5.02 ± 1.04 | 5.34 ± 1.22 | 0.68 | |
| 89.25 ± 15.66 | 92.05 ± 14.22 | 0.83 | 86.23 ± 11.98 | 90.83 ± 12.12 | 0.73 | 87.87 ± 15.57 | 93.45 ± 12.78 | 0.54 | |
| 86.72 ± 22.46 | 92.34 ± 17.01 | 0.69 | 85.60 ± 20.99 | 91.48 ± 19.25 | 0.60 | 85.79 ± 19.42 | 90.16 ± 18.77 | 0.61 | |
All the data were presented as mean ± SD. EH, essential hypertensive patients; NT, normotensive subjects; BMI, body mass index; SBP, systolic blood pressure; DBP, diastolic blood pressure; TG, triglyceride; TC, total cholesterol; HDL-C, high density lipoprotein cholesterol; LDL-C, low density lipoprotein cholesterol; Glu, blood glucose; BUN, blood urea nitrogen; Cr, creatinine; UA, uric acid, * P < 0.05, ** P < 0.01.
Genotype and allele distribution in normotensive and essential hypertensive participants
| Total | Male | Female | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| SNPs | Genotype | NT(n = 495) | EH(n = 490) | P | NT(n = 293) | EH(n = 316) | P | NT(n = 202) | EH(n = 174) | P |
| TT | 2(0.4%) | 3(0.6%) | 0.44 | 2(0.7%) | 3(0.9%) | 0.65 | 0(0.0%) | 0(0.0%) | 0.38 | |
| TC | 48(9.7%) | 37(7.6%) | 29(9.9%) | 25(7.9%) | 19(9.4%) | 12(6.9%) | ||||
| CC | 445(89.9%) | 450(91.8%) | 262(89.4%) | 288(91.1%) | 183(90.6%) | 162(93.1%) | ||||
| TT + TC | 50(10.1%) | 40(8.9%) | 0.29 | 31(10.6%) | 28(8.9%) | 0.47 | 19(9.4%) | 12(6.9%) | 0.39 | |
| CC | 445(89.9%) | 450(91.1%) | 262(89.4%) | 288(91.1%) | 183(90.6%) | 162(93.1%) | ||||
| OR | 1.26 | 1.22 | 1.40 | |||||||
| 95% CI | 0.82-1.96 | 0.71-2.08 | 0.66-2.98 | |||||||
| CC + TC | 493(99.6%) | 487(99.4%) | 0.65 | 291(99.3%) | 313(99.1%) | 0.72 | 202(100%) | 174(100%) | - | |
| TT | 2(0.4%) | 3(0.6%) | 2(0.7%) | 3(0.9%) | 0 | 0 | ||||
| OR | 1.52 | 1.40 | - | |||||||
| 95% CI | 0.25-9.13 | 0.23-8.41 | - | |||||||
| T | 52(5.3%) | 43(4.4%) | 0.37 | 33(5.6%) | 31(4.9%) | 0.57 | 19(4.7%) | 12(3.4%) | 0.39 | |
| C | 938(94.7%) | 937(95.6%) | 553(94.4%) | 601(95.1%) | 385(95.3%) | 336(96.6%) | ||||
| OR | 1.21 | 1.16 | 0.38 | |||||||
| 95% CI | 0.80-1.83 | 0.70-1.91 | 0.66-2.89 | |||||||
| CC | 0(0.0%) | 5(1.0%) | 0.005 | 0(0.0%) | 4(1.3%) | 0.01 | 0(0.0%) | 1(0.6%) | 0.33 | |
| CA | 21(4.2%) | 38(7.8%) | 11(3.8%) | 25(7.9%) | 10(5.0%) | 13(10.6%) | ||||
| AA | 474(95.8%) | 447(91.2%) | 282(96.2%) | 287(90.8%) | 192(95.0%) | 160(92.0%) | ||||
| CC + CA | 21(4.2%) | 43(8.8%) | 0.004 | 11(3.8%) | 29(9.2%) | 0.007 | 10(5.0%) | 14(8.0%) | 0.22 | |
| AA | 474(95.8%) | 447(91.2%) | 282(96.2%) | 287(90.8%) | 192(95.0%) | 160(92.0%) | ||||
| OR | 0.461 | 0.386 | 0.595 | |||||||
| 95% CI | 0.189-0.788 | 0.257-1.376 | ||||||||
| AA + CA | 495(100%) | 485(99.0%) | 0.02 | 293(100%) | 312(98.7%) | 0.05 | 202(100%) | 173(99.4%) | 0.28 | |
| CC | 0(0%) | 5(1.0%) | 0(0%) | 4(1.3%) | 0(0%) | 1(0.6%) | ||||
| OR | 1.010 | 1.013 | 1.006 | |||||||
| 95% CI | 1.001-1.019 | 1.000-1.026 | 0.994-1.017 | |||||||
| C | 21(2.1%) | 48(4.9%) | 0.001 | 11(1.9%) | 33(5.2%) | 0.002 | 10(2.5%) | 15(4.3%) | 0.16 | |
| A | 969(97.9%) | 932(95.1%) | 575(98.1%) | 599(94.8%) | 394(97.5%) | 333(95.7%) | ||||
| OR | 0.421 | 0.347 | 0.563 | |||||||
| 95% CI | 0.250-708 | 0.174-0.694 | 0.250-1.271 | |||||||
| TT | 43(8.7%) | 33(6.7%) | 0.39 | 30(10.2%) | 16(5.1%) | 0.046 | 13(6.4%) | 17(9.8%) | 0.045 | |
| TC | 200(40.4%) | 191(39.0%) | 115(39.2%) | 124(39.2%) | 85(42.1%) | 67(38.5%) | ||||
| CC | 252(50.9%) | 266(54.3%) | 148(50.5%) | 176(55.7%) | 104(51.5%) | 90(51.7%) | ||||
| TT + TC | 243(49.1%) | 224(45.7%) | 0.29 | 145(49.5%) | 140(44.3%) | 0.20 | 98(48.5%) | 84(48.3%) | 0.96 | |
| CC | 252(50.9%) | 266(54.3%) | 148(50.5%) | 176(55.7%) | 104(51.5%) | 90(51.7%) | ||||
| OR | 1.145 | 1.232 | 1.010 | |||||||
| 95% CI | 0.892-1.471 | 0.895-1.694 | 0.673-1.515 | |||||||
| CC + TC | 452(91.3%) | 457(93.3%) | 0.25 | 263(89.8%) | 300(95.0%) | 0.02 | 189(93.6%) | 157(90.2%) | 0.23 | |
| TT | 43(8.7%) | 33(6.7%) | 30(10.2%) | 16(5.0%) | 13(6.4%) | 17(9.8%) | ||||
| OR | 0.759 | 0.468 | 1.574 | |||||||
| 95% CI | 0.474-1.217 | 0.249-0.877 | 0.742-3.341 | |||||||
| T | 286(28.9%) | 257(26.2%) | 0.19 | 175(30.0%) | 156(24.7%) | 0.05 | 111(27.5%) | 101(29.0%) | 0.63 | |
| C | 704(71.1%) | 723(73.8%) | 415(70.0%) | 476(75.3%) | 293(72.5%) | 247(71.0%) | ||||
| OR | 1.143 | 1.287 | 0.926 | |||||||
| 95% CI | 0.938-1.393 | 0.999-1.657 | 0.674-1.274 | |||||||
EH, essential hypertensive group; NT, normotensive group; OR, odds ratio; 95%CI, 95% confidence interval.
Results of multiple logistic regression analysis: final significant variables in equation
| Risk Factor | P | OR | 95% C.I | |
|---|---|---|---|---|
| 30.73 | <0.01 | 0.80 | 0.74-0.87 | |
| 5.69 | <0.01 | 7.58 | 1.53-11.97 | |
| 6.12 | <0.05 | 6.77 | 1.07-1.83 | |
| 9.51 | <0.01 | 1.07 | 1.02-1.11 | |
| 27.93 | <0.01 | 0.92 | 0.90-0.95 |
BMI, body mass index; OR, odds ratio; 95%CI, 95% confidence interval.
Haplotype analysis in normotensive and essential hypertensive participants
| Haplotype | Total | Male | Female | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T1880C | C602A | T1559C | EH | NT | P | EH | NT | P | EH | NT | P | |
| H1 | G | T | G | 0.66 | 0.64 | 0.43 | 0.66 | 0.63 | 0.17 | 0.64 | 0.66 | 0.60 |
| H2 | G | T | A | 0.25 | 0.29 | 0.10 | 0.24 | 0.30 | 0.02 | 0.28 | 0.27 | 0.68 |
| H3 | A | T | G | 0.04 | 0.05 | 0.28 | 0.04 | 0.05 | 0.34 | 0.03 | 0.04 | 0.40 |
| H4 | G | G | G | 0.04 | 0.02 | 0.008 | 0.05 | 0.02 | 0.01 | 0.03 | 0.02 | 0.36 |
| H5 | G | G | A | 0.008 | 0.002 | 0.16 | 0.006 | 0.003 | 0.09 | 0.009 | 0.004 | 0.46 |
| H6 | A | T | A | 0.002 | 0.002 | 0.92 | 0.003 | 0.005 | 0.82 | 0.004 | 0.004 | 0.80 |
EH, essential hypertensive patients; NT, normotensive subjects.
Figure 1Linkage disequilibrium analysis and haplotype block analysis of SNP T1880C, C602A and T1559C. A. Linkage disequilibrium structure and the degree of linkage disequilibrium (D') for each SNP (T1880C, C602A and T1559C) pair. B. LD structure and the degree of linkage disequilibrium (r') for each SNP (T1880C, C602A and T1559C) pair. C. SNPs associating to hypertension and D' haplotype block. 1-T1880C; 2-C602A; 3-T1559C.