Literature DB >> 20732870

Tethering of poly(A)-binding protein interferes with non-translated mRNA decay from the 5' end in yeast.

Tatsuhisa Tsuboi1, Toshifumi Inada.   

Abstract

The decay of eukaryotic mRNA is triggered mainly by deadenylation, which leads to decapping and degradation from the 5' end of an mRNA. Poly(A)-binding protein has been proposed to inhibit the decapping process and to stabilize mRNA by blocking the recruitment of mRNA to the P-bodies where mRNA degradation takes place after stimulation of translation initiation. In contrast, several lines of evidence show that poly(A)-binding protein (Pab1p) has distinct functions in mRNA decay and translation in yeast. To address the translation-independent function of Pab1p in inhibition of decapping, we examined the contribution of Pab1p to the stability of non-translated mRNAs, an AUG codon-less mRNA or an mRNA containing a stable stem-loop structure at the 5'-UTR. Tethering of Pab1p stabilized non-translated mRNAs, and this stabilization did not require either the eIF4G-interacting domain of Pab1p or the Pab1p-interacting domain of eIF4G. In a ski2Δ mutant in which 3' to 5' mRNA degradation activity is defective, stabilization of non-translated mRNAs by the tethering of Pab1p lacking an eIF4G-interacting domain (Pab1-34Cp) requires a cap structure but not a poly(A) tail. In wild type cells, stabilization of non-translated mRNA by tethered Pab1-34Cp results in the accumulation of deadenylated mRNA. These results strongly suggest that tethering of Pab1p may inhibit the decapping reaction after deadenylation, independent of translation. We propose that Pab1p inhibits the decapping reaction in a translation-independent manner in vivo.

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Year:  2010        PMID: 20732870      PMCID: PMC2962457          DOI: 10.1074/jbc.M110.117150

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  41 in total

1.  Translation initiation factor eIF4G mediates in vitro poly(A) tail-dependent translation.

Authors:  S Z Tarun; S E Wells; J A Deardorff; A B Sachs
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-19       Impact factor: 11.205

2.  The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex.

Authors:  J S Anderson; R P Parker
Journal:  EMBO J       Date:  1998-03-02       Impact factor: 11.598

3.  Regulatable promoters of Saccharomyces cerevisiae: comparison of transcriptional activity and their use for heterologous expression.

Authors:  D Mumberg; R Müller; M Funk
Journal:  Nucleic Acids Res       Date:  1994-12-25       Impact factor: 16.971

4.  RNA recognition motif 2 of yeast Pab1p is required for its functional interaction with eukaryotic translation initiation factor 4G.

Authors:  S H Kessler; A B Sachs
Journal:  Mol Cell Biol       Date:  1998-01       Impact factor: 4.272

5.  An essential component of the decapping enzyme required for normal rates of mRNA turnover.

Authors:  C A Beelman; A Stevens; G Caponigro; T E LaGrandeur; L Hatfield; D M Fortner; R Parker
Journal:  Nature       Date:  1996-08-15       Impact factor: 49.962

6.  The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases.

Authors:  P Mitchell; E Petfalski; A Shevchenko; M Mann; D Tollervey
Journal:  Cell       Date:  1997-11-14       Impact factor: 41.582

7.  Multiple functions for the poly(A)-binding protein in mRNA decapping and deadenylation in yeast.

Authors:  G Caponigro; R Parker
Journal:  Genes Dev       Date:  1995-10-01       Impact factor: 11.361

8.  Turnover mechanisms of the stable yeast PGK1 mRNA.

Authors:  D Muhlrad; C J Decker; R Parker
Journal:  Mol Cell Biol       Date:  1995-04       Impact factor: 4.272

9.  mRNA stabilization by poly(A) binding protein is independent of poly(A) and requires translation.

Authors:  J M Coller; N K Gray; M P Wickens
Journal:  Genes Dev       Date:  1998-10-15       Impact factor: 11.361

10.  Poly(A) tail length control in Saccharomyces cerevisiae occurs by message-specific deadenylation.

Authors:  C E Brown; A B Sachs
Journal:  Mol Cell Biol       Date:  1998-11       Impact factor: 4.272

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  7 in total

1.  The tRNA Splicing Endonuclease Complex Cleaves the Mitochondria-localized CBP1 mRNA.

Authors:  Tatsuhisa Tsuboi; Reina Yamazaki; Risa Nobuta; Ken Ikeuchi; Shiho Makino; Ayumi Ohtaki; Yutaka Suzuki; Tohru Yoshihisa; Christopher Trotta; Toshifumi Inada
Journal:  J Biol Chem       Date:  2015-05-13       Impact factor: 5.157

2.  RNA-RNA interactions and pre-mRNA mislocalization as drivers of group II intron loss from nuclear genomes.

Authors:  Guosheng Qu; Xiaolong Dong; Carol Lyn Piazza; Venkata R Chalamcharla; Sheila Lutz; M Joan Curcio; Marlene Belfort
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-10       Impact factor: 11.205

3.  Roles of mRNA fate modulators Dhh1 and Pat1 in TNRC6-dependent gene silencing recapitulated in yeast.

Authors:  Shiho Makino; Yuichiro Mishima; Kunio Inoue; Toshifumi Inada
Journal:  J Biol Chem       Date:  2015-02-05       Impact factor: 5.157

Review 4.  Roles of mRNA poly(A) tails in regulation of eukaryotic gene expression.

Authors:  Lori A Passmore; Jeff Coller
Journal:  Nat Rev Mol Cell Biol       Date:  2021-09-30       Impact factor: 94.444

5.  Is there a classical nonsense-mediated decay pathway in trypanosomes?

Authors:  Praveen Delhi; Rafael Queiroz; Diana Inchaustegui; Mark Carrington; Christine Clayton
Journal:  PLoS One       Date:  2011-09-21       Impact factor: 3.240

6.  Aspergillus oryzae AoSO is a novel component of stress granules upon heat stress in filamentous fungi.

Authors:  Hsiang-Ting Huang; Jun-ichi Maruyama; Katsuhiko Kitamoto
Journal:  PLoS One       Date:  2013-08-21       Impact factor: 3.240

7.  Trypanosome MKT1 and the RNA-binding protein ZC3H11: interactions and potential roles in post-transcriptional regulatory networks.

Authors:  Aditi Singh; Igor Minia; Dorothea Droll; Abeer Fadda; Christine Clayton; Esteban Erben
Journal:  Nucleic Acids Res       Date:  2014-01-26       Impact factor: 16.971

  7 in total

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