Literature DB >> 20730021

On the Interfragment Exchange in the X-Pol Method.

Alessandro Cembran1, Peng Bao, Yingjie Wang, Lingchun Song, Donald G Truhlar, Jiali Gao.   

Abstract

The inclusion of exchange repulsion terms in the explicit polarization (X-Pol) model is examined by antisymmetrizing the X-Pol Hartree-product wave function; this yields XPol with full eXchange, called X-Pol-X. When the monomers are treated by Hartree-Fock theory, this calculation can be accomplished by using the formalism of block-localized wave functions (BLW) that has been used in a variety of applications. In this case the block-localized structure in the X-Pol-X wave function allows for decomposition of the full Fock matrix of a dimension of M blocks into M smaller Fock matrices. The method is illustrated by considering two trimer structures of water clusters, and it is found that the total exchange repulsion energies in these hydrogen-bonding test cases are adequately treated and-to a good approximation- are pairwise additive. We also present a formalism to yield a simplified Fock matrix by making use of the neglect of interfragment differential overlap (NIDO) approximation, which is less severe than the neglect of diatomic differential overlap (NDDO) approximation.

Entities:  

Year:  2010        PMID: 20730021      PMCID: PMC2922695          DOI: 10.1021/ct100268p

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  19 in total

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Journal:  J Phys Chem A       Date:  2006-08-24       Impact factor: 2.781

6.  Block-Localized Density Functional Theory (BLDFT), Diabatic Coupling, and Their Use in Valence Bond Theory for Representing Reactive Potential Energy Surfaces.

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Journal:  J Chem Theory Comput       Date:  2009-10-13       Impact factor: 6.006

7.  X-Pol Potential: An Electronic Structure-Based Force Field for Molecular Dynamics Simulation of a Solvated Protein in Water.

Authors:  Wangshen Xie; Modesto Orozco; Donald G Truhlar; Jiali Gao
Journal:  J Chem Theory Comput       Date:  2009-02-17       Impact factor: 6.006

8.  A Non-Orthogonal Block-Localized Effective Hamiltonian Approach for Chemical and Enzymatic Reactions.

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Journal:  J Chem Theory Comput       Date:  2010-07-13       Impact factor: 6.006

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  10 in total

1.  Communication: variational many-body expansion: accounting for exchange repulsion, charge delocalization, and dispersion in the fragment-based explicit polarization method.

Authors:  Jiali Gao; Yingjie Wang
Journal:  J Chem Phys       Date:  2012-02-21       Impact factor: 3.488

2.  Quantum mechanical force field for water with explicit electronic polarization.

Authors:  Jaebeom Han; Michael J M Mazack; Peng Zhang; Donald G Truhlar; Jiali Gao
Journal:  J Chem Phys       Date:  2013-08-07       Impact factor: 3.488

3.  Incorporation of charge transfer into the explicit polarization fragment method by grand canonical density functional theory.

Authors:  Miho Isegawa; Jiali Gao; Donald G Truhlar
Journal:  J Chem Phys       Date:  2011-08-28       Impact factor: 3.488

4.  Multilevel X-Pol: a fragment-based method with mixed quantum mechanical representations of different fragments.

Authors:  Yingjie Wang; Carlos P Sosa; Alessandro Cembran; Donald G Truhlar; Jiali Gao
Journal:  J Phys Chem B       Date:  2012-03-19       Impact factor: 2.991

5.  Multistate Density Functional Theory for Effective Diabatic Electronic Coupling.

Authors:  Haisheng Ren; Makenzie R Provorse; Peng Bao; Zexing Qu; Jiali Gao
Journal:  J Phys Chem Lett       Date:  2016-06-07       Impact factor: 6.475

6.  Optimization of the explicit polarization (X-Pol) potential using a hybrid density functional.

Authors:  Jaebeom Han; Donald G Truhlar; Jiali Gao
Journal:  Theor Chem Acc       Date:  2012-03       Impact factor: 1.702

7.  Quantum mechanical force fields for condensed phase molecular simulations.

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Journal:  J Phys Condens Matter       Date:  2017-08-17       Impact factor: 2.333

8.  A variational linear-scaling framework to build practical, efficient next-generation orbital-based quantum force fields.

Authors:  Timothy J Giese; Haoyuan Chen; Thakshila Dissanayake; George M Giambaşu; Hugh Heldenbrand; Ming Huang; Erich R Kuechler; Tai-Sung Lee; Maria T Panteva; Brian K Radak; Darrin M York
Journal:  J Chem Theory Comput       Date:  2013-03-12       Impact factor: 6.006

9.  Multipolar Ewald methods, 2: applications using a quantum mechanical force field.

Authors:  Timothy J Giese; Maria T Panteva; Haoyuan Chen; Darrin M York
Journal:  J Chem Theory Comput       Date:  2015-02-10       Impact factor: 6.006

10.  Explicit polarization: a quantum mechanical framework for developing next generation force fields.

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Journal:  Acc Chem Res       Date:  2014-08-06       Impact factor: 22.384

  10 in total

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