Literature DB >> 20716530

Effect of vitamin K-dependent protein precursor propeptide, vitamin K hydroquinone, and glutamate substrate binding on the structure and function of {gamma}-glutamyl carboxylase.

Shannon L Higgins-Gruber1, Vasantha P Mutucumarana, Pen-Jen Lin, James W Jorgenson, Darrel W Stafford, David L Straight.   

Abstract

The γ-glutamyl carboxylase utilizes four substrates to catalyze carboxylation of certain glutamic acid residues in vitamin K-dependent proteins. How the enzyme brings the substrates together to promote catalysis is an important question in understanding the structure and function of this enzyme. The propeptide is the primary binding site of the vitamin K-dependent proteins to carboxylase. It is also an effector of carboxylase activity. We tested the hypothesis that binding of substrates causes changes to the carboxylase and in turn to the substrate-enzyme interactions. In addition we investigated how the sequences of the propeptides affected the substrate-enzyme interaction. To study these questions we employed fluorescently labeled propeptides to measure affinity for the carboxylase. We also measured the ability of several propeptides to increase carboxylase catalytic activity. Finally we determined the effect of substrates: vitamin K hydroquinone, the pentapeptide FLEEL, and NaHCO(3), on the stability of the propeptide-carboxylase complexes. We found a wide variation in the propeptide affinities for carboxylase. In contrast, the propeptides tested had similar effects on carboxylase catalytic activity. FLEEL and vitamin K hydroquinone both stabilized the propeptide-carboxylase complex. The two together had a greater effect than either alone. We conclude that the effect of propeptide and substrates on carboxylase controls the order of substrate binding in such a way as to ensure efficient, specific carboxylation.

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Year:  2010        PMID: 20716530      PMCID: PMC2951224          DOI: 10.1074/jbc.M110.143297

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  25 in total

1.  A novel fluorescence assay to study propeptide interaction with gamma-glutamyl carboxylase.

Authors:  S R Presnell; A Tripathy; B R Lentz; D Y Jin; D W Stafford
Journal:  Biochemistry       Date:  2001-10-02       Impact factor: 3.162

2.  A quantum chemical study of the mechanism of action of Vitamin K carboxylase (VKC) III. Intermediates and transition states.

Authors:  Charles H Davis; David Deerfield; Troy Wymore; Darrel W Stafford; Lee G Pedersen
Journal:  J Mol Graph Model       Date:  2006-11-06       Impact factor: 2.518

3.  The propeptide of the vitamin K-dependent carboxylase substrate accelerates formation of the gamma-glutamyl carbanion intermediate.

Authors:  S Li; B C Furie; B Furie; C T Walsh
Journal:  Biochemistry       Date:  1997-05-27       Impact factor: 3.162

4.  The propeptides of the vitamin K-dependent proteins possess different affinities for the vitamin K-dependent carboxylase.

Authors:  T B Stanley; D Y Jin; P J Lin; D W Stafford
Journal:  J Biol Chem       Date:  1999-06-11       Impact factor: 5.157

5.  Missense mutations at ALA-10 in the factor IX propeptide: an insignificant variant in normal life but a decisive cause of bleeding during oral anticoagulant therapy.

Authors:  J Oldenburg; E M Quenzel; U Harbrecht; A Fregin; W Kress; C R Müller; H J Hertfelder; R Schwaab; H H Brackmann; P Hanfland
Journal:  Br J Haematol       Date:  1997-07       Impact factor: 6.998

6.  Amino acids responsible for reduced affinities of vitamin K-dependent propeptides for the carboxylase.

Authors:  T B Stanley; J Humphries; K A High; D W Stafford
Journal:  Biochemistry       Date:  1999-11-23       Impact factor: 3.162

7.  Glutamyl substrate-induced exposure of a free cysteine residue in the vitamin K-dependent gamma-glutamyl carboxylase is critical for vitamin K epoxidation.

Authors:  B A Bouchard; B Furie; B C Furie
Journal:  Biochemistry       Date:  1999-07-20       Impact factor: 3.162

8.  Brønsted analysis reveals Lys218 as the carboxylase active site base that deprotonates vitamin K hydroquinone to initiate vitamin K-dependent protein carboxylation.

Authors:  Mark A Rishavy; Kevin W Hallgren; Anna V Yakubenko; Rebecca L Shtofman; Kurt W Runge; Kathleen L Berkner
Journal:  Biochemistry       Date:  2006-11-07       Impact factor: 3.162

9.  Insight into the coupling mechanism of the vitamin K-dependent carboxylase: mutation of histidine 160 disrupts glutamic acid carbanion formation and efficient coupling of vitamin K epoxidation to glutamic acid carboxylation.

Authors:  Mark A Rishavy; Kathleen L Berkner
Journal:  Biochemistry       Date:  2008-08-22       Impact factor: 3.162

10.  Quantum chemical study of the mechanism of action of vitamin K carboxylase (VKC). IV. Intermediates and transition states.

Authors:  Charles H Davis; David Deerfield Ii; Darrel W Stafford; Lee G Pedersen
Journal:  J Phys Chem A       Date:  2007-05-16       Impact factor: 2.781

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  9 in total

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Authors:  Jian-Ke Tie; Jorge D A Carneiro; Da-Yun Jin; Ciro D Martinhago; Cees Vermeer; Darrel W Stafford
Journal:  Blood       Date:  2016-01-12       Impact factor: 22.113

2.  Functional Study of the Vitamin K Cycle Enzymes in Live Cells.

Authors:  J-K Tie; D W Stafford
Journal:  Methods Enzymol       Date:  2016-11-22       Impact factor: 1.600

3.  Insights into vitamin K-dependent carboxylation: home field advantage.

Authors:  Francis Ayombil; Rodney M Camire
Journal:  Haematologica       Date:  2020-08       Impact factor: 9.941

Review 4.  Structural and functional insights into enzymes of the vitamin K cycle.

Authors:  J-K Tie; D W Stafford
Journal:  J Thromb Haemost       Date:  2016-01-29       Impact factor: 5.824

Review 5.  The Molecular Basis of FIX Deficiency in Hemophilia B.

Authors:  Guomin Shen; Meng Gao; Qing Cao; Weikai Li
Journal:  Int J Mol Sci       Date:  2022-03-02       Impact factor: 5.923

6.  Characterization of missense mutations in the signal peptide and propeptide of FIX in hemophilia B by a cell-based assay.

Authors:  Wenwen Gao; Yaqi Xu; Hongli Liu; Meng Gao; Qing Cao; Yiyi Wang; Longteng Cui; Rong Huang; Yan Shen; Sanqiang Li; Haiping Yang; Yixiang Chen; Chaokun Li; Haichuan Yu; Weikai Li; Guomin Shen
Journal:  Blood Adv       Date:  2020-08-11

7.  A conformational investigation of propeptide binding to the integral membrane protein γ-glutamyl carboxylase using nanodisc hydrogen exchange mass spectrometry.

Authors:  Christine H Parker; Christopher R Morgan; Kasper D Rand; John R Engen; James W Jorgenson; Darrel W Stafford
Journal:  Biochemistry       Date:  2014-02-26       Impact factor: 3.162

8.  The WAGR syndrome gene PRRG4 is a functional homologue of the commissureless axon guidance gene.

Authors:  Elizabeth D Justice; Sarah J Barnum; Thomas Kidd
Journal:  PLoS Genet       Date:  2017-08-31       Impact factor: 5.917

9.  Vitamin K-dependent carboxylation of coagulation factors: insights from a cell-based functional study.

Authors:  Zhenyu Hao; Da-Yun Jin; Darrel W Stafford; Jian-Ke Tie
Journal:  Haematologica       Date:  2019-10-17       Impact factor: 9.941

  9 in total

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