Literature DB >> 20715028

NMR-based protein potentials.

Da-Wei Li1, Rafael Brüschweiler.   

Abstract

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Year:  2010        PMID： 20715028     DOI： 10.1002/anie.201001898

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


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  68 in total

1.  The unusual internal motion of the villin headpiece subdomain.

Authors:  Kyle W Harpole; Evan S O'Brien; Matthew A Clark; C James McKnight; Liliya Vugmeyster; A Joshua Wand
Journal:  Protein Sci       Date:  2015-10-29       Impact factor: 6.725

2.  Dynamic architecture of a protein kinase.

Authors:  Christopher L McClendon; Alexandr P Kornev; Michael K Gilson; Susan S Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-15       Impact factor: 11.205

3.  Toward a predictive understanding of slow methyl group dynamics in proteins.

Authors:  Dong Long; Da-Wei Li; Korvin F A Walter; Christian Griesinger; Rafael Brüschweiler
Journal:  Biophys J       Date:  2011-08-17       Impact factor: 4.033

4.  Intrinsic α-helical and β-sheet conformational preferences: a computational case study of alanine.

Authors:  Diego Caballero; Jukka Määttä; Alice Qinhua Zhou; Maria Sammalkorpi; Corey S O'Hern; Lynne Regan
Journal:  Protein Sci       Date:  2014-05-09       Impact factor: 6.725

Review 5.  Chemical shifts in biomolecules.

Authors:  David A Case
Journal:  Curr Opin Struct Biol       Date:  2013-02-17       Impact factor: 6.809

6.  Simulations of the regulatory ACT domain of human phenylalanine hydroxylase (PAH) unveil its mechanism of phenylalanine binding.

Authors:  Yunhui Ge; Elias Borne; Shannon Stewart; Michael R Hansen; Emilia C Arturo; Eileen K Jaffe; Vincent A Voelz
Journal:  J Biol Chem       Date:  2018-10-04       Impact factor: 5.157

Review 7.  The dark energy of proteins comes to light: conformational entropy and its role in protein function revealed by NMR relaxation.

Authors:  A Joshua Wand
Journal:  Curr Opin Struct Biol       Date:  2012-12-13       Impact factor: 6.809

8.  A composite approach towards a complete model of the myosin rod.

Authors:  E Nihal Korkmaz; Keenan C Taylor; Michael P Andreas; Guatam Ajay; Nathan T Heinze; Qiang Cui; Ivan Rayment
Journal:  Proteins       Date:  2015-12-09

9.  Molecular Dynamics Simulations of 441 Two-Residue Peptides in Aqueous Solution: Conformational Preferences and Neighboring Residue Effects with the Amber ff99SB-ildn-NMR Force Field.

Authors:  Shuxiang Li; Casey T Andrews; Tamara Frembgen-Kesner; Mark S Miller; Stephen L Siemonsma; Timothy D Collingsworth; Isaac T Rockafellow; Nguyet Anh Ngo; Brady A Campbell; Reid F Brown; Chengxuan Guo; Michael Schrodt; Yu-Tsan Liu; Adrian H Elcock
Journal:  J Chem Theory Comput       Date:  2015-03-10       Impact factor: 6.006

10.  Parametrization of Backbone Flexibility in a Coarse-Grained Force Field for Proteins (COFFDROP) Derived from All-Atom Explicit-Solvent Molecular Dynamics Simulations of All Possible Two-Residue Peptides.

Authors:  Tamara Frembgen-Kesner; Casey T Andrews; Shuxiang Li; Nguyet Anh Ngo; Scott A Shubert; Aakash Jain; Oluwatoni J Olayiwola; Mitch R Weishaar; Adrian H Elcock
Journal:  J Chem Theory Comput       Date:  2015-04-30       Impact factor: 6.006
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