Literature DB >> 20694258

DNA as supramolecular scaffold for functional molecules: progress in DNA nanotechnology.

Thomas J Bandy1, Ashley Brewer, Jonathan R Burns, Gabriella Marth, Thaonguyen Nguyen, Eugen Stulz.   

Abstract

Oligonucleotides have recently gained increased attraction as a supramolecular scaffold for the design and synthesis of functional molecules on the nanometre scale. This tutorial review focuses on the recent progress in this highly active field of research with an emphasis on covalent modifications of DNA; non-covalent interactions of DNA with molecules such as groove binders or intercalators are not part of this review. Both terminal and internal modifications are covered, and the various points of attachment (nucleobase, sugar moiety or phosphodiester backbone) are compared. Using selected examples of the recent literature, the diversity of the functionalities that have been incorporated into DNA strands is discussed.

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Year:  2010        PMID: 20694258     DOI: 10.1039/b820255a

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  29 in total

1.  A feasible approach to evaluate the relative reactivity of NHS-ester activated group with primary amine-derivatized DNA analogue and non-derivatized impurity.

Authors:  Shuping Dou; John Virostko; Dale L Greiner; Alvin C Powers; Guozheng Liu
Journal:  Nucleosides Nucleotides Nucleic Acids       Date:  2015       Impact factor: 1.381

Review 2.  25 years and still going strong: 2'-O-(pyren-1-yl)methylribonucleotides - versatile building blocks for applications in molecular biology, diagnostics and materials science.

Authors:  Patrick J Hrdlicka; Saswata Karmakar
Journal:  Org Biomol Chem       Date:  2017-11-29       Impact factor: 3.876

3.  Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease.

Authors:  Markus Probst; Walter Aeschimann; Thi T H Chau; Simon M Langenegger; Achim Stocker; Robert Häner
Journal:  Nucleic Acids Res       Date:  2016-07-15       Impact factor: 16.971

4.  DNA strands with alternating incorporations of LNA and 2'-O-(pyren-1-yl)methyluridine: SNP-discriminating RNA detection probes.

Authors:  Saswata Karmakar; Patrick J Hrdlicka
Journal:  Chem Sci       Date:  2013-09-01       Impact factor: 9.825

5.  Oligonucleotide-Based Systems for Input-Controlled and Non-Covalently Regulated Protein-Binding.

Authors:  Cooper Battle; Xiaozhu Chu; Janarthanan Jayawickramarajah
Journal:  Supramol Chem       Date:  2013-01-01       Impact factor: 1.688

6.  Introduction of multiphosphonate ligand to peptide nucleic acid for metal ion conjugation.

Authors:  Yuichiro Aiba; Yuta Honda; Yue Han; Makoto Komiyama
Journal:  Artif DNA PNA XNA       Date:  2012-04-01

7.  Reversible light switch for macrocycle mobility in a DNA rotaxane.

Authors:  Finn Lohmann; Damian Ackermann; Michael Famulok
Journal:  J Am Chem Soc       Date:  2012-07-16       Impact factor: 15.419

8.  FRETmatrix: a general methodology for the simulation and analysis of FRET in nucleic acids.

Authors:  Søren Preus; Kristine Kilså; Francois-Alexandre Miannay; Bo Albinsson; L Marcus Wilhelmsson
Journal:  Nucleic Acids Res       Date:  2012-09-12       Impact factor: 16.971

9.  Diarylethene-modified nucleotides for switching optical properties in DNA.

Authors:  Sebastian Barrois; Hans-Achim Wagenknecht
Journal:  Beilstein J Org Chem       Date:  2012-06-20       Impact factor: 2.883

10.  Addressable and unidirectional energy transfer along a DNA three-way junction programmed by pyrrole-imidazole polyamides.

Authors:  Wu Su; Clive R Bagshaw; Glenn A Burley
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

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