Literature DB >> 20692061

More genomic resources for less-studied crops.

Rajeev K Varshney1, Jean-Christophe Glaszmann, Hei Leung, Jean-Marcel Ribaut.   

Abstract

Many of the crop species considered to be minor on a global scale, yet are important locally for food security in the developing world, have remained less-studied crops. Recent years have witnessed the development of large-scale genomic and genetic resources, including simple sequence repeat, single nucleotide polymorphism and diversity array technology markers, expressed sequence tags or transcript reads, bacterial artificial chromosome libraries, genetic and physical maps, and genetic stocks with rich genetic diversity, such as core reference sets and introgression lines in these crops. These resources have the potential to accelerate gene discovery and initiate molecular breeding in these crops, thereby enhancing crop productivity to ensure food security in developing countries. Copyright 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20692061     DOI: 10.1016/j.tibtech.2010.06.007

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  31 in total

Review 1.  Application of large-scale sequencing to marker discovery in plants.

Authors:  Robert J Henry; Mark Edwards; Daniel L E Waters; S Gopala Krishnan; Peter Bundock; Timothy R Sexton; Ardashir K Masouleh; Catherine J Nock; Julie Pattemore
Journal:  J Biosci       Date:  2012-11       Impact factor: 1.826

2.  High-throughput SNP discovery and genotyping in durum wheat (Triticum durum Desf.).

Authors:  Daniele Trebbi; Marco Maccaferri; Peter de Heer; Anker Sørensen; Silvia Giuliani; Silvio Salvi; Maria Corinna Sanguineti; Andrea Massi; Edwin Andries Gerard van der Vossen; Roberto Tuberosa
Journal:  Theor Appl Genet       Date:  2011-05-25       Impact factor: 5.699

3.  Development of gene-based markers for use in construction of the chickpea (Cicer arietinum L.) genetic linkage map and identification of QTLs associated with seed weight and plant height.

Authors:  Shefali Gupta; Tapan Kumar; Subodh Verma; Chellapilla Bharadwaj; Sabhyata Bhatia
Journal:  Mol Biol Rep       Date:  2015-10-07       Impact factor: 2.316

Review 4.  Modernising breeding for orphan crops: tools, methodologies, and beyond.

Authors:  Jean-Marcel Ribaut; Michel Ragot
Journal:  Planta       Date:  2019-06-29       Impact factor: 4.116

5.  An intra-specific consensus genetic map of pigeonpea [Cajanus cajan (L.) Millspaugh] derived from six mapping populations.

Authors:  Abhishek Bohra; Rachit K Saxena; B N Gnanesh; Kulbhushan Saxena; M Byregowda; Abhishek Rathore; P B Kavikishor; Douglas R Cook; Rajeev K Varshney
Journal:  Theor Appl Genet       Date:  2012-07-08       Impact factor: 5.699

6.  Simple sequence repeat marker development from bacterial artificial chromosome end sequences and expressed sequence tags of flax (Linum usitatissimum L.).

Authors:  Sylvie Cloutier; Evelyn Miranda; Kerry Ward; Natasa Radovanovic; Elsa Reimer; Andrzej Walichnowski; Raju Datla; Gordon Rowland; Scott Duguid; Raja Ragupathy
Journal:  Theor Appl Genet       Date:  2012-04-07       Impact factor: 5.699

Review 7.  Bacterial artificial chromosome libraries of pulse crops: characteristics and applications.

Authors:  Kangfu Yu
Journal:  J Biomed Biotechnol       Date:  2011-07-26

8.  Single feature polymorphisms (SFPs) for drought tolerance in pigeonpea (Cajanus spp.).

Authors:  Rachit K Saxena; Xinping Cui; Vivek Thakur; Barbara Walter; Timothy J Close; Rajeev K Varshney
Journal:  Funct Integr Genomics       Date:  2011-05-06       Impact factor: 3.410

Review 9.  Next-generation phenotyping: requirements and strategies for enhancing our understanding of genotype-phenotype relationships and its relevance to crop improvement.

Authors:  Joshua N Cobb; Genevieve Declerck; Anthony Greenberg; Randy Clark; Susan McCouch
Journal:  Theor Appl Genet       Date:  2013-03-08       Impact factor: 5.699

10.  Development of DArT marker platforms and genetic diversity assessment of the U.S. collection of the new oilseed crop lesquerella and related species.

Authors:  Von Mark V Cruz; Andrzej Kilian; David A Dierig
Journal:  PLoS One       Date:  2013-05-28       Impact factor: 3.240

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