Literature DB >> 20688161

Nano-structure of the laminin γ-1 short arm reveals an extended and curved multidomain assembly.

Trushar R Patel1, Gordon A Morris, Daniela Zwolanek, Douglas R Keene, Jianhua Li, Stephen E Harding, Manuel Koch, Jörg Stetefeld.   

Abstract

Laminins are multidomain glycoproteins that play important roles in development and maintenance of the extracellular matrix via their numerous interactions with other proteins. Several receptors for the laminin short arms revealed their importance in network formation and intercellular signaling. However, both the detailed structure of the laminin γ-1 short arm and its organization within the complexes is poorly understood due to the complexity of the molecule and the lack of a high-resolution structure. The presented data provide the first subatomic resolution structure for the laminin γ-1 short arm in solution. This was achieved using an integrated approach that combined a number of complementary biophysical techniques such as small angle X-ray scattering (SAXS), analytical ultracentrifugation, dynamic light scattering and electron microscopy. As a result of this study, we have obtained a significantly improved model for the laminin γ-1 short arm that represents a major step forward in molecular understanding of laminin-mediated complex formations. Crown
Copyright © 2010. Published by Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20688161     DOI: 10.1016/j.matbio.2010.07.004

Source DB:  PubMed          Journal:  Matrix Biol        ISSN: 0945-053X            Impact factor:   11.583


  17 in total

1.  Conformational itinerary of Pseudomonas aeruginosa 1,6-anhydro-N-acetylmuramic acid kinase during its catalytic cycle.

Authors:  John-Paul Bacik; Marjan Tavassoli; Trushar R Patel; Sean A McKenna; David J Vocadlo; Mazdak Khajehpour; Brian L Mark
Journal:  J Biol Chem       Date:  2013-12-20       Impact factor: 5.157

Review 2.  Dynamic light scattering: a practical guide and applications in biomedical sciences.

Authors:  Jörg Stetefeld; Sean A McKenna; Trushar R Patel
Journal:  Biophys Rev       Date:  2016-10-06

3.  Recognition of viral RNA stem-loops by the tandem double-stranded RNA binding domains of PKR.

Authors:  Edis Dzananovic; Trushar R Patel; Soumya Deo; Kevin McEleney; Jörg Stetefeld; Sean A McKenna
Journal:  RNA       Date:  2013-01-17       Impact factor: 4.942

4.  T-shaped arrangement of the recombinant agrin G3-IgG Fc protein.

Authors:  Trushar R Patel; Markus Meier; Jianhua Li; Gordon Morris; Arthur J Rowe; Jörg Stetefeld
Journal:  Protein Sci       Date:  2011-04-26       Impact factor: 6.725

5.  Interaction studies of a protein and carbohydrate system using an integrated approach: a case study of the miniagrin-heparin system.

Authors:  Trushar R Patel; Tabot M D Besong; Markus Meier; Kevin McEleney; Stephen E Harding; Donald J Winzor; Jörg Stetefeld
Journal:  Eur Biophys J       Date:  2018-03-12       Impact factor: 1.733

6.  Spontaneous Helical Structure Formation in Laminin Nanofibers.

Authors:  John M Szymanski; Mengchen Ba; Adam W Feinberg
Journal:  J Mater Chem B       Date:  2015-08-21       Impact factor: 6.331

7.  Binding of G-quadruplexes to the N-terminal recognition domain of the RNA helicase associated with AU-rich element (RHAU).

Authors:  Markus Meier; Trushar R Patel; Evan P Booy; Oksana Marushchak; Natalie Okun; Soumya Deo; Ryan Howard; Kevin McEleney; Stephen E Harding; Jörg Stetefeld; Sean A McKenna
Journal:  J Biol Chem       Date:  2013-10-22       Impact factor: 5.157

8.  The β-lactamase gene regulator AmpR is a tetramer that recognizes and binds the D-Ala-D-Ala motif of its repressor UDP-N-acetylmuramic acid (MurNAc)-pentapeptide.

Authors:  Grishma Vadlamani; Misty D Thomas; Trushar R Patel; Lynda J Donald; Thomas M Reeve; Jörg Stetefeld; Kenneth G Standing; David J Vocadlo; Brian L Mark
Journal:  J Biol Chem       Date:  2014-12-05       Impact factor: 5.157

9.  Structure and hydrodynamics of a DNA G-quadruplex with a cytosine bulge.

Authors:  Markus Meier; Aniel Moya-Torres; Natalie J Krahn; Matthew D McDougall; George L Orriss; Ewan K S McRae; Evan P Booy; Kevin McEleney; Trushar R Patel; Sean A McKenna; Jörg Stetefeld
Journal:  Nucleic Acids Res       Date:  2018-06-01       Impact factor: 16.971

10.  Crystal structures of the network-forming short-arm tips of the laminin β1 and γ1 chains.

Authors:  Federico Carafoli; Sadaf-Ahmahni Hussain; Erhard Hohenester
Journal:  PLoS One       Date:  2012-07-31       Impact factor: 3.240

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